nRc.2.0.1.g06588 (Romanomermis culicivorax)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nRc.2.0.1.g06588 T309882_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AAEL009588
M02388_2.00 		Aedes aegypti
NRGGTCR
YGACCYN		 PBM
Weirauch et al.(2014)
pTH5508 		0.812 0.887
Hr46
M02406_2.00 		Drosophila melanogaster
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6142 		0.812 0.887
Hr46
M03926_2.00 		Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY		 SELEX
Nitta et al.(2015)
Hr46_1 		0.812 0.887
Hr46
M06412_2.00 		Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT		 B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448 		0.812 0.887
Hr46
M06413_2.00 		Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD		 B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448 		0.812 0.887
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nRc.2.0.1.t06588-RA Nuclear receptor 11 72

Links

Other Nuclear receptor family TFs
Other Romanomermis culicivorax TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_02463 Ancylostoma caninum ANCCAN_02463 I 0.863
ANCCEY_04472 Ancylostoma ceylanicum ANCCEY_04472 I 0.863
ANCDUO_05038 Ancylostoma duodenale ANCDUO_05038 I 0.863
DICVIV_02571 Dictyocaulus viviparus DICVIV_02571 I 0.863
HCOI00459200 Haemonchus contortus HCOI00459200 I 0.863
HPBE_0002253301 Heligmosomoides bakeri HPBE_0002253301 I 0.863
NBR_0001130501 Nippostrongylus brasiliensis NBR_0001130501 I 0.863
NECAME_12319 Necator americanus NECAME_12319 I 0.863
OESDEN_06389 Oesophagostomum dentatum OESDEN_06389 I 0.863
SVUK_0000075101 Strongylus vulgaris SVUK_0000075101 I 0.863
TELCIR_23664 Teladorsagia circumcincta TELCIR_23664 I 0.863
EFV52739 Trichinella spiralis EFV52739 I 0.860
D917_06357 Trichinella nativa D917_06357 I 0.860
D918_07931 Trichuris suis D918_07931 I 0.860
TMUE_s0002001200 Trichuris muris TMUE_s0002001200 I 0.860
MhA1_Contig91.frz3.fgene1 Meloidogyne hapla MhA1_Contig91.frz3.fgene1 I 0.838
CBG21929 Caenorhabditis briggsae CBG21929 I 0.837
CBN02985 Caenorhabditis brenneri CBN02985 I 0.837
CBN04090 Caenorhabditis brenneri CBN04090 I 0.837
CJA19190 Caenorhabditis japonica CJA19190 I 0.837
CRE07841 Caenorhabditis remanei CRE07841 I 0.837
nhr-23 Caenorhabditis elegans WBGene00003622 I 0.837
PTRK_0000297600 Parastrongyloides trichosuri PTRK_0000297600 I 0.837
SPAL_0001289900 Strongyloides papillosus SPAL_0001289900 I 0.837
SSTP_0000571300 Strongyloides stercoralis SSTP_0000571300 I 0.837
SVE_0162100 Strongyloides venezuelensis SVE_0162100 I 0.837
tetur03g08440 Tetranychus urticae tetur03g08440 I 0.834
Minc18013 Meloidogyne incognita Minc18013 I 0.833
ACOC_0000193701 Angiostrongylus costaricensis ACOC_0000193701 I 0.828
WUBG_01907 Wuchereria bancrofti WUBG_01907 I 0.825
Bm1896 Brugia malayi Bm1896 I 0.825
LOAG_17726 Loa loa LOAG_17726 I 0.825
WBGene00237273 Onchocerca volvulus WBGene00237273 I 0.825
nAv.1.0.1.g04088 Acanthocheilonema viteae nAv.1.0.1.g04088 I 0.825
nDi.2.2.2.g01984 Dirofilaria immitis nDi.2.2.2.g01984 I 0.825
nLs.2.1.2.g01548 Litomosoides sigmodontis nLs.2.1.2.g01548 I 0.825
nOo.2.0.1.g04971 Onchocerca ochengi nOo.2.0.1.g04971 I 0.825
OFLC_0000996401 Onchocerca flexuosa OFLC_0000996401 I 0.825
TCLT_0000877001 Thelazia callipaeda TCLT_0000877001 I 0.825
SMUV_0000054801 Syphacia muris SMUV_0000054801 I 0.821
ACYPI56793 Acyrthosiphon pisum ACYPI56793 I 0.816
DAPPUDRAFT_311954 Daphnia pulex DAPPUDRAFT_311954 I 0.816
GB47512 Apis mellifera GB47512 I 0.816
L798_14277 Zootermopsis nevadensis L798_14277 I 0.816
PHUM053030 Pediculus humanus PHUM053030 I 0.816
TC008909 Tribolium castaneum TC008909 I 0.816
Cflo_02082--XP_392128.3_APIME Camponotus floridanus Cflo_02082--XP_392128.3_APIME I 0.816
Hsal_00190--XP_392128.3_APIME Harpegnathos saltator Hsal_00190--XP_392128.3_APIME I 0.816
CpipJ_CPIJ018862 Culex pipiens CpipJ_CPIJ018862 I 0.812
AAEL009588 Aedes aegypti AAEL009588 D 0.812
ADAC010413 Anopheles darlingi ADAC010413 I 0.812
HR3 Anopheles gambiae AGAP009002 I 0.812
CPIJ018862 Culex quinquefasciatus CPIJ018862 I 0.812
Hr46 Drosophila melanogaster FBgn0000448 D 0.812
GA17350 Drosophila pseudoobscura FBgn0077363 I 0.812
GF12134 Drosophila ananassae FBgn0089173 I 0.812
GG25225 Drosophila erecta FBgn0117349 I 0.812
GH20117 Drosophila grimshawi FBgn0127581 I 0.812
GI20211 Drosophila mojavensis FBgn0142947 I 0.812
GL10487 Drosophila persimilis FBgn0148097 I 0.812
GD26001 Drosophila simulans FBgn0197277 I 0.812
GJ20161 Drosophila virilis FBgn0207301 I 0.812
GK18019 Drosophila willistoni FBgn0220018 I 0.812
GE21721 Drosophila yakuba FBgn0238967 I 0.812
MESCA004840 Megaselia scalaris MESCA004840 I 0.812
RPRC003681 Rhodnius prolixus RPRC003681 I 0.812
LCUP005897 Lucilia cuprina LCUP005897 I 0.812
AALB001895 Anopheles albimanus AALB001895 I 0.812
AARA009565 Anopheles arabiensis AARA009565 I 0.812
AATE000030 Anopheles atroparvus AATE000030 I 0.812
ACOM040478 Anopheles coluzzii ACOM040478 I 0.812
ACUA018625 Anopheles culicifacies ACUA018625 I 0.812
ADIR005051 Anopheles dirus ADIR005051 I 0.812
AEPI000053 Anopheles epiroticus AEPI000053 I 0.812
AFAF003674 Anopheles farauti AFAF003674 I 0.812
AFUN005646 Anopheles funestus AFUN005646 I 0.812
AMEC000069 Anopheles melas AMEC000069 I 0.812
AMEM011649 Anopheles merus AMEM011649 I 0.812
AMIN009445 Anopheles minimus AMIN009445 I 0.812
AQUA002307 Anopheles quadriannulatus AQUA002307 I 0.812
ASTEI01984 Anopheles stephensi ASTEI01984 I 0.812
BGLB011692 Biomphalaria glabrata BGLB011692 I 0.812
MDOA014655 Musca domestica MDOA014655 I 0.812
BGIBMGA009688 Bombyx mori BGIBMGA009688 I 0.811
KGM_07654 Danaus plexippus KGM_07654 I 0.811
CLEC025067 Cimex lectularius CLEC025067 I 0.811
TMUE_s0006008200 Trichuris muris TMUE_s0006008200 I 0.809
LotgiG129003 Lottia gigantea LotgiG129003 I 0.807
Ocbimv22009591m.g Octopus bimaculoides Ocbimv22009591m.g I 0.807
BXY_0995200 Bursaphelenchus xylophilus BXY_0995200 I 0.806
ALUE_0000764201 Ascaris lumbricoides ALUE_0000764201 I 0.796
ASIM_0001506001 Anisakis simplex ASIM_0001506001 I 0.796
ASU_12682 Ascaris suum ASU_12682 I 0.796
EVEC_0000666701 Enterobius vermicularis EVEC_0000666701 I 0.796
L596_g27271 Steinernema carpocapsae L596_g27271 I 0.792
L889_g21400 Steinernema feltiae L889_g21400 I 0.792
L892_g11850 Steinernema scapterisci L892_g11850 I 0.792
L893_g17058 Steinernema glaseri L893_g17058 I 0.792
GPUH_0001263801 Gongylonema pulchrum GPUH_0001263801 I 0.782
GPUH_0002479401 Gongylonema pulchrum GPUH_0002479401 I 0.782
L596_g15085 Steinernema carpocapsae L596_g15085 I 0.782
L889_g21815 Steinernema feltiae L889_g21815 I 0.782
L892_g2208 Steinernema scapterisci L892_g2208 I 0.782
L893_g16513 Steinernema glaseri L893_g16513 I 0.782
L898_g865 Steinernema monticolum L898_g865 I 0.782
GPLIN_000052400 Globodera pallida GPLIN_000052400 I 0.771
HelroG67463 Helobdella robusta HelroG67463 I 0.770
RSKR_0000217000 Rhabditophanes kr3021 RSKR_0000217000 I 0.759
ALUE_0000420701 Ascaris lumbricoides ALUE_0000420701 I 0.757
D917_06796 Trichinella nativa D917_06796 I 0.757
TCNE_0001111701 Toxocara canis TCNE_0001111701 I 0.757
CGI_10010779 Crassostrea gigas CGI_10010779 I 0.756
tetur19g00650 Tetranychus urticae tetur19g00650 I 0.752