CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold542-EXSNAP2012.12
(
Pristionchus exspectatus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
scaffold542-EXSNAP2012.12
T310277_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold542-EXSNAP2012.12
Nuclear receptor
8
78
RICLICGAKAESAHFGVVSCRACAAFFKRAVVLSRNYICRQSTDSCTVSKETKFTCRRCRWVKCIAAGMKP
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus exspectatus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPA26904
Pristionchus pacificus
PPA26904
N
0.986
scaffold119-EXSNAP2012.21
Pristionchus exspectatus
scaffold119-EXSNAP2012.21
N
0.914
scaffold861-EXSNAP2012.4
Pristionchus exspectatus
scaffold861-EXSNAP2012.4
N
0.831
scaffold1278-EXSNAP2012.5
Pristionchus exspectatus
scaffold1278-EXSNAP2012.5
N
0.828