CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLAFG00000027474
(
Loxodonta africana
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSLAFG00000027474
T311060_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TP53
M09337_2.00
Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH
Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A
0.701
0.701
TP53
M09621_2.00
Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN
Misc
Heinz et al.(2010)
Saos-p53
0.701
0.701
TP53
M11197_2.00
Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY
Transfac
Matys et al.(2006)
V$P53_01
0.701
0.701
TP53
M11198_2.00
Homo sapiens
NGRCWTGYYY
RRRCAWGYCN
Transfac
Matys et al.(2006)
V$P53_02
0.701
0.701
TP53
M11199_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_03
0.701
0.701
TP53
M11200_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_04
0.701
0.701
TP53
M11201_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_05
0.701
0.701
TP53
M11202_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3_01
0.701
0.701
TP53
M11203_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3
0.701
0.701
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000018379
p53
82
268
SSVPSQKTYCSNCGFHLGFLHSGTAKSVTCTYSPDLNKLFCQLAKTCPVQLTTPLHPSTCVHTMAIYRCQHMTEVVQHCPHLECYSDYSDGLAAPQHLIQVGGILRADICDTITLRHSVGYPMSYLRSVLTTTIHFNFMCSSSCMGGEPILTIITLEDSDGNLLGHNSFEVHICCSGRDRRTEEENF
Links
Other
p53
family TFs
Other
Loxodonta africana
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSLAFG00000027348
Loxodonta africana
ENSLAFG00000027348
N
0.923
TP53
Homo sapiens
ENSG00000141510
D
0.848
ENSLAFG00000032042
Loxodonta africana
ENSLAFG00000032042
I
0.729
ENSLAFG00000030880
Loxodonta africana
ENSLAFG00000030880
I
0.724
ENSOCUG00000001138
Oryctolagus cuniculus
ENSOCUG00000001138
I
0.717
ENSBTAP00000001420-D1
Bos grunniens
ENSBTAP00000001420-D1
I
0.717
ENSLAFG00000028299
Loxodonta africana
ENSLAFG00000028299
I
0.713
ENSLAFG00000027820
Loxodonta africana
ENSLAFG00000027820
N
0.709
ENSLAFG00000027365
Loxodonta africana
ENSLAFG00000027365
I
0.707
ENSLAFG00000028692
Loxodonta africana
ENSLAFG00000028692
I
0.706
ENSPPYG00000007934
Pongo abelii
ENSPPYG00000007934
I
0.706
TP53
Procavia capensis
ENSPCAG00000012725
I
0.704
TP53
Pan troglodytes
ENSPTRG00000008703
I
0.701
TP53
Sus scrofa
ENSSSCG00000017950
I
0.701