CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP011796
(
Lucilia cuprina
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
LCUP011796
T312238_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PAX7
M00346_2.00
Homo sapiens
NGTYAYGSHN
NDSCRTRACN
PBM
Barrera et al.(2016)
PAX7_REF
0.752
0.752
PAX7
M00345_2.00
Homo sapiens
NSGTCACGSN
NSCGTGACSN
PBM
Barrera et al.(2016)
PAX7_P112L
0.743
0.743
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP011796-PA
Paired box
49
157
SQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPKVTSPEIESRIKEMCKANPGLFSWEIREKLIKVSVM
Links
Other
Paired box
family TFs
Other
Lucilia cuprina
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AFUN002668
Anopheles funestus
AFUN002668
I
0.881
ACEP15310
Atta cephalotes
ACEP15310
I
0.860
ISCW003096
Ixodes scapularis
ISCW003096
I
0.851
AMAM016481
Anopheles maculatus
AMAM016481
I
0.835
CpipJ_CPIJ019791
Culex pipiens
CpipJ_CPIJ019791
I
0.833
CPIJ019791
Culex quinquefasciatus
CPIJ019791
I
0.833
SINV15897
Solenopsis invicta
SINV15897
I
0.817
Cflo_06473--XP_394848.3_APIME
Camponotus floridanus
Cflo_06473--XP_394848.3_APIME
I
0.817
ACUA026425
Anopheles culicifacies
ACUA026425
I
0.814
AMIN006553
Anopheles minimus
AMIN006553
I
0.814
GL14130
Drosophila persimilis
FBgn0151735
I
0.807
SMAR015380
Strigamia maritima
SMAR015380
I
0.798
AFAF004706
Anopheles farauti
AFAF004706
I
0.795
YQE_12759
Dendroctonus ponderosae
YQE_12759
N
0.789
CpipJ_CPIJ006494
Culex pipiens
CpipJ_CPIJ006494
I
0.788
CPIJ006494
Culex quinquefasciatus
CPIJ006494
I
0.788
ALUE_0000098101
Ascaris lumbricoides
ALUE_0000098101
I
0.786
ALUE_0001653201
Ascaris lumbricoides
ALUE_0001653201
I
0.786
ENSGMOG00000003366
Gadus morhua
ENSGMOG00000003366
I
0.780
ENSORLG00000019389
Oryzias latipes
ENSORLG00000019389
I
0.780
ACEP15304
Atta cephalotes
ACEP15304
I
0.777
OFLC_0000380401
Onchocerca flexuosa
OFLC_0000380401
I
0.776
PAX7
Homo sapiens
ENSG00000009709
D
0.752
Pax7
Dipodomys ordii
ENSDORG00000011854
I
0.752
ENSMODG00000025571
Monodelphis domestica
ENSMODG00000025571
I
0.752
PAX7
Procavia capensis
ENSPCAG00000005303
I
0.752
Alligator_sinensis_CCG006492.1
Alligator sinensis
Alligator_sinensis_CCG006492.1
I
0.752
OESDEN_18680
Oesophagostomum dentatum
OESDEN_18680
I
0.750
PAX5
Tupaia belangeri
ENSTBEG00000007983
I
0.745
ENSTSYG00000008085
Tarsius syrichta
ENSTSYG00000008085
I
0.745
PAX5
Tursiops truncatus
ENSTTRG00000006049
I
0.745
DAPPUDRAFT_65647
Daphnia pulex
DAPPUDRAFT_65647
I
0.734
CpipJ_CPIJ009206
Culex pipiens
CpipJ_CPIJ009206
I
0.720
CPIJ009206
Culex quinquefasciatus
CPIJ009206
I
0.720
pax6a
Danio rerio
ENSDARG00000103379
I
0.714
SMAR008441
Strigamia maritima
SMAR008441
I
0.712
AALB001246
Anopheles albimanus
AALB001246
N
0.711