CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf00563-snap-gene-0.14
(
Meloidogyne floridensis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
maker-nMf.1.1.scaf00563-snap-gene-0.14
T312779_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf00563-snap-gene-0.14-mRNA-1
Paired box
19
97
STIQETTRNNSTNNWQQKIKTKGKYGTKPKVATPAVVAKIEAYKRENPTIFAWEIRERLIEEAVCQQPPSISSINRILR
Links
Other
Paired box
family TFs
Other
Meloidogyne floridensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc08872
Meloidogyne incognita
Minc08872
N
0.867
maker-nMf.1.1.scaf06147-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf06147-augustus-gene-0.3
N
0.838
L892_g3679
Steinernema scapterisci
L892_g3679
I
0.750
EVEC_0000903001
Enterobius vermicularis
EVEC_0000903001
N
0.716