CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g02363
(
Litomosoides sigmodontis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
nLs.2.1.2.g02363
T312833_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t02363-RA
Paired box
71
196
GQGRINQLGGVFINGRPLPQHIRIKIIEMASNGIKPCHISRQLRVSHGAVSKILNRYVETGSVSPGQIGGNPRSRLAIQAVEKHILELKAKCPGLCASELRSCLIEQEICSPENAPTVSSINRHIR
Links
Other
Paired box
family TFs
Other
Litomosoides sigmodontis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OFLC_0000380401
Onchocerca flexuosa
OFLC_0000380401
I
1.000
LOAG_04282
Loa loa
LOAG_04282
N
0.984
WUBG_03652
Wuchereria bancrofti
WUBG_03652
N
0.975
nAv.1.0.1.g09239
Acanthocheilonema viteae
nAv.1.0.1.g09239
N
0.968
BTMF_0001220301
Brugia timori
BTMF_0001220301
N
0.944
TCLT_0000479701
Thelazia callipaeda
TCLT_0000479701
N
0.944
EEL_0000119101
Elaeophora elaphi
EEL_0000119101
N
0.936
OFLC_0001260801
Onchocerca flexuosa
OFLC_0001260801
N
0.933
WBGene00247363
Onchocerca volvulus
WBGene00247363
N
0.912
nOo.2.0.1.g04237
Onchocerca ochengi
nOo.2.0.1.g04237
N
0.912
PEQ_0000701201
Parascaris equorum
PEQ_0000701201
I
0.850
ALUE_0000098101
Ascaris lumbricoides
ALUE_0000098101
I
0.829
ALUE_0001653201
Ascaris lumbricoides
ALUE_0001653201
I
0.829
EVEC_0000839201
Enterobius vermicularis
EVEC_0000839201
N
0.816
Hba_09392
Heterorhabditis bacteriophora
Hba_09392
N
0.779
KGM_02686
Danaus plexippus
KGM_02686
I
0.742
DICVIV_03564
Dictyocaulus viviparus
DICVIV_03564
N
0.728
SNAPOd2T00016386001
Oikopleura dioica
SNAPOd2T00016386001
I
0.717
NBR_0001663601
Nippostrongylus brasiliensis
NBR_0001663601
N
0.712
SMUV_0000066101
Syphacia muris
SMUV_0000066101
N
0.712
SMTD_0001918101
Schistosoma mattheei
SMTD_0001918101
I
0.710
SROB_0000822501
Schistosoma rodhaini
SROB_0000822501
I
0.710
ANCCEY_09890
Ancylostoma ceylanicum
ANCCEY_09890
N
0.706
augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0
I
0.706