CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra78863
(
Phytophthora ramorum
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
Phyra78863
T314001_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra78863
Pipsqueak
268
311
PPETWEKAIAAVEQQGMSLRAAAKMYGVHFAALHRRVKKRAQGG
Links
Other
Pipsqueak
family TFs
Other
Phytophthora ramorum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Physo145458
Phytophthora sojae
Physo145458
N
0.977
fgenesh_scip_prom.28083.11902
Phytophthora lateralis
fgenesh_scip_prom.28083.11902
N
0.955
fgenesh_scip_prom.46568.5717
Phytophthora kernoviae
fgenesh_scip_prom.46568.5717
N
0.864
maker-pve_contig_1653-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_1653-fgenesh-gene-0.0
N
0.864