CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra84978
(
Phytophthora ramorum
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
Phyra84978
T314004_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra84978
Pipsqueak
20
60
EWAQAVHAVVERRLTLRQSAQAFGLQQAALHRLVRQHTLQQ
Phyra84978
Pipsqueak
383
422
EAAMEDVAIHGMSLRNAAKAHGVHFAALHRRLKKRQQHKL
Links
Other
Pipsqueak
family TFs
Other
Phytophthora ramorum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra84977
Phytophthora ramorum
Phyra84977
N
1.000
Phyra74784
Phytophthora ramorum
Phyra74784
N
1.000
Phyra74785
Phytophthora ramorum
Phyra74785
N
1.000
fgenesh_scip_prom.28083.7007
Phytophthora lateralis
fgenesh_scip_prom.28083.7007
N
1.000
Physo129336
Phytophthora sojae
Physo129336
N
0.923
PITG_12296
Phytophthora infestans
PITG_12296
N
0.913
F443_17620
Phytophthora parasitica
F443_17620
N
0.910