CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0002s14570
(
Populus trichocarpa
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04640 (PLATZ)
IPR006734
POPTR_0002s14570
T315632_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0002s14570.1
PLATZ
79
150
RRYVYNDVLRVDDAQKLFDSAFVQSYTTNSAKVIFLNQRPLTRPVNIRGNICSRCDRGLQFPYLFCSISCKF
Links
Other
PLATZ
family TFs
Other
Populus trichocarpa
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0033s0510
Salix purpurea
SapurV1A.0033s0510
N
0.917
POPTR_0014s05840
Populus trichocarpa
POPTR_0014s05840
N
0.875
SapurV1A.0382s0270
Salix purpurea
SapurV1A.0382s0270
N
0.861
PK01122.1
Cannabis sativa
PK01122.1
N
0.722
Solyc01g091000.2
Solanum lycopersicum
Solyc01g091000.2
N
0.708
TCM_005554
Theobroma cacao
TCM_005554
N
0.708
VIT_15s0048g00580
Vitis vinifera
VIT_15s0048g00580
N
0.708
Cla006768
Citrullus lanatus
Cla006768
N
0.708
30174.m008836
Ricinus communis
30174.m008836
N
0.708
cassava14439.m1
Manihot esculenta
cassava14439.m1
N
0.708
cassava17724.valid.m1
Manihot esculenta
cassava17724.valid.m1
N
0.708
Cucsa.120560
Cucumis sativus
Cucsa.120560
N
0.708
evm.TU.supercontig_145.1
Carica papaya
evm.TU.supercontig_145.1
N
0.708