CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.3.607.1
(
Physcomitrella patens
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
e_gw1.3.607.1
T315906_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.3.607.1
PLATZ
67
138
RRYVYHDVIRLQDIQRLLDCATVQTYIINSARVVFLNQRPQPRPSKGLGNACGTCDRSLQDSYAYCSVACKV
Links
Other
PLATZ
family TFs
Other
Physcomitrella patens
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.3.608.1
Physcomitrella patens
e_gw1.3.608.1
N
0.972
estExt_Genewise1.C_5600001
Physcomitrella patens
estExt_Genewise1.C_5600001
N
0.972
estExt_fgenesh1_pg.C_4410003
Physcomitrella patens
estExt_fgenesh1_pg.C_4410003
N
0.944
SELMODRAFT_4756
Selaginella moellendorffii
SELMODRAFT_4756
N
0.847
SELMODRAFT_4832
Selaginella moellendorffii
SELMODRAFT_4832
N
0.847
SELMODRAFT_412053
Selaginella moellendorffii
SELMODRAFT_412053
N
0.833
SELMODRAFT_429924
Selaginella moellendorffii
SELMODRAFT_429924
N
0.833
SELMODRAFT_425306
Selaginella moellendorffii
SELMODRAFT_425306
N
0.819
SELMODRAFT_427354
Selaginella moellendorffii
SELMODRAFT_427354
N
0.819
VIT_02s0154g00150
Vitis vinifera
VIT_02s0154g00150
N
0.708