CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10019603m.g
(
Capsella rubella
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
Carubv10019603m.g
T315992_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10019603m
PLATZ
1
64
MSMYMDLSGIQTYTINGFPIVYINQRRGNDNHRFRNNVSHRCQVCEWELDASSSALFCSIECKF
Links
Other
PLATZ
family TFs
Other
Capsella rubella
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0926s0042
Capsella grandiflora
Cagra.0926s0042
N
1.000
Bostr.6864s0167
Boechera stricta
Bostr.6864s0167
N
0.810
AT3G50808
Arabidopsis thaliana
AT3G50808
N
0.762
fgenesh2_kg.5__1421__AT3G50810.1
Arabidopsis lyrata
fgenesh2_kg.5__1421__AT3G50810.1
N
0.762