CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.C_scaffold_390000008
(
Phytophthora capsici
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
fgenesh1_pm.C_scaffold_390000008
T316217_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_scaffold_390000008
PLATZ
16
97
RDKRQQEEVEQLQPVALAGASKRSTNRSELCSSFAVTREEFEGRRKAVSEGSANWEQCGTCTRSFVVGTSRYTGFCSLDCKS
Links
Other
PLATZ
family TFs
Other
Phytophthora capsici
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HpaG803767
Hyaloperonospora arabidopsidis
HpaG803767
N
0.818
fgenesh_scip_prom.46568.2262
Phytophthora kernoviae
fgenesh_scip_prom.46568.2262
N
0.814
Phyra83848
Phytophthora ramorum
Phyra83848
N
0.773
fgenesh_scip_prom.28083.9398
Phytophthora lateralis
fgenesh_scip_prom.28083.9398
N
0.750