ENSLACG00000001788 (Latimeria chalumnae)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSLACG00000001788 T317217_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.897 0.897
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.897 0.897
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.897 0.897
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.897 0.897
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.897 0.897
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.897 0.897
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.897 0.897
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.897 0.897
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.897 0.897
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.897 0.897
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.897 0.897
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.897 0.897
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.897 0.897
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.897 0.897
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.897 0.897
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.897 0.897
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.897 0.897
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.897 0.897
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.872 0.872
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.795 0.795
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.795 0.795
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.795 0.795
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.795 0.795
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.795 0.795
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.795 0.795
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.795 0.795
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.795 0.795
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.795 0.795
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.795 0.795
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.795 0.795
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.795 0.795
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.795 0.795
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.795 0.795
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.795 0.795
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.795 0.795
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.795 0.795
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.795 0.795
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.795 0.795
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.795 0.795
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.795 0.795
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.795 0.795
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.769 0.769
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.769 0.769
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.769 0.769
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.769 0.769
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.769 0.769
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.769 0.769
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.769 0.769
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.769 0.769
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000001999 Rel 417 455

Links

Other Rel family TFs
Other Latimeria chalumnae TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000000859-D1 Bos grunniens ENSBTAP00000000859-D1 I 0.972
NFATC1 Echinops telfairi ENSETEG00000010848 I 0.943
ENSAPLG00000013017 Anas platyrhynchos ENSAPLG00000013017 I 0.897
ENSFALG00000013333 Ficedula albicollis ENSFALG00000013333 I 0.897
ENSGALG00000012654 Gallus gallus ENSGALG00000012654 I 0.897
NFATC1 Loxodonta africana ENSLAFG00000008297 I 0.897
NFATC1 Meleagris gallopavo ENSMGAG00000002215 D 0.897
Nfatc1 Mus musculus ENSMUSG00000033016 D 0.897
Aan_R015322 Calypte anna Aan_R015322 I 0.897
Afo_R009327 Aptenodytes forsteri Afo_R009327 I 0.897
Gfo_R000615 Geospiza fortis Gfo_R000615 I 0.897
ENSCJAG00000000574 Callithrix jacchus ENSCJAG00000000574 I 0.889
NFATC1 Anolis carolinensis ENSACAG00000000941 I 0.872
NFATC1 Callithrix jacchus ENSCJAG00000023446 I 0.872
NFATC1 Equus caballus ENSECAG00000019813 I 0.872
Nfatc1 Rattus norvegicus ENSRNOG00000017146 I 0.872
Pvit_05133 Pogona vitticeps Pvit_05133 I 0.872
nfatc1 Xenopus tropicalis XB-GENE-876756 D 0.872
NFATC4 Homo sapiens ENSG00000100968 D 0.857
ENSMPUG00000016650 Mustela putorius furo ENSMPUG00000016650 I 0.846
Cmyd_10021444 Chelonia mydas Cmyd_10021444 I 0.846
ENSSARG00000011370 Sorex araneus ENSSARG00000011370 I 0.829
ENSAMXG00000011048 Astyanax mexicanus ENSAMXG00000011048 I 0.821
NFATC3 Dasypus novemcinctus ENSDNOG00000018583 I 0.821
nfatc1 Oryzias latipes ENSORLG00000008055 I 0.821
ENSFALG00000007757 Ficedula albicollis ENSFALG00000007757 I 0.795
ENSFALG00000013042 Ficedula albicollis ENSFALG00000013042 I 0.795
NFATC3 Gallus gallus ENSGALG00000003396 I 0.795
NFATC2 Gallus gallus ENSGALG00000007963 I 0.795
NFATC3 Loxodonta africana ENSLAFG00000014599 I 0.795
NFATC3 Meleagris gallopavo ENSMGAG00000003992 I 0.795
NFATC2 Meleagris gallopavo ENSMGAG00000009346 I 0.795
NFATC2 Microcebus murinus ENSMICG00000000025 N 0.795
NFATC2 Macaca mulatta ENSMMUG00000012657 N 0.795
Nfatc3 Mus musculus ENSMUSG00000031902 D 0.795
ENSNLEG00000005116 Nomascus leucogenys ENSNLEG00000005116 I 0.795
ENSONIG00000007307 Oreochromis niloticus ENSONIG00000007307 I 0.795
ENSPPYG00000007483 Pongo abelii ENSPPYG00000007483 I 0.795
ENSPSIG00000013745 Pelodiscus sinensis ENSPSIG00000013745 I 0.795
Nfatc3 Rattus norvegicus ENSRNOG00000054264 I 0.795
NFATC2 Tupaia belangeri ENSTBEG00000004525 I 0.795
NFATC3 Taeniopygia guttata ENSTGUG00000007006 I 0.795
ENSTSYG00000005095 Tarsius syrichta ENSTSYG00000005095 I 0.795
ENSXMAG00000000761 Xiphophorus maculatus ENSXMAG00000000761 I 0.795
ENSXMAG00000009087 Xiphophorus maculatus ENSXMAG00000009087 I 0.795
Aan_R003860 Calypte anna Aan_R003860 I 0.795
Alligator_sinensis_CCG001714.1 Alligator sinensis Alligator_sinensis_CCG001714.1 I 0.795
Cmyd_10017459 Chelonia mydas Cmyd_10017459 I 0.795
Gfo_R015940 Geospiza fortis Gfo_R015940 I 0.795
Myotis_brandtii_NFATC3_10015104 Myotis brandtii Myotis_brandtii_NFATC3_10015104 I 0.795
Pvit_03343 Pogona vitticeps Pvit_03343 I 0.795
Pvit_07799 Pogona vitticeps Pvit_07799 I 0.795
ENSAMEG00000015941 Ailuropoda melanoleuca ENSAMEG00000015941 I 0.769
ENSAMXG00000005881 Astyanax mexicanus ENSAMXG00000005881 I 0.769
NFATC4 Bos taurus ENSBTAG00000006366 I 0.769
NFATC4 Canis familiaris ENSCAFG00000012375 I 0.769
nfatc2b Danio rerio ENSDARG00000079972 I 0.769
NFATC4 Equus caballus ENSECAG00000010992 I 0.769
NFATC4 Felis catus ENSFCAG00000005602 I 0.769
NFATC1 Gasterosteus aculeatus ENSGACG00000005481 I 0.769
ENSGMOG00000006631 Gadus morhua ENSGMOG00000006631 I 0.769
NFATC4 Loxodonta africana ENSLAFG00000014579 I 0.769
NFATC4 Myotis lucifugus ENSMLUG00000011274 I 0.769
ENSMPUG00000005665 Mustela putorius furo ENSMPUG00000005665 I 0.769
ENSOARG00000019084 Ovis aries ENSOARG00000019084 I 0.769
ENSPFOG00000000831 Poecilia formosa ENSPFOG00000000831 I 0.769
ENSPFOG00000021891 Poecilia formosa ENSPFOG00000021891 I 0.769
Nfatc4 Rattus norvegicus ENSRNOG00000020482 I 0.769
NFATC4 Sus scrofa ENSSSCG00000001986 I 0.769
ENSXMAG00000003976 Xiphophorus maculatus ENSXMAG00000003976 I 0.769
ENSP00000388910-D1 Bos grunniens ENSP00000388910-D1 I 0.769
Myotis_brandtii_Nfatc4_10003693 Myotis brandtii Myotis_brandtii_Nfatc4_10003693 I 0.769
Ogr08131 Ophisaurus gracilis Ogr08131 I 0.769
nfatc3a Danio rerio ENSDARG00000076297 I 0.744
ENSGMOG00000017004 Gadus morhua ENSGMOG00000017004 I 0.744
ENSLOCG00000002372 Lepisosteus oculatus ENSLOCG00000002372 I 0.744
ENSONIG00000016552 Oreochromis niloticus ENSONIG00000016552 I 0.744