CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM17131
(
Drosophila sechellia
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
FBgn0172042
T317636_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Dif
M03953_2.00
Drosophila melanogaster
BGGGWTTTYCCCN
NGGGRAAAWCCCV
SELEX
Nitta et al.(2015)
Dif_1
0.988
0.988
Dif
M03954_2.00
Drosophila melanogaster
NGGGDWTTHCCCN
NGGGDAAWHCCCN
SELEX
Nitta et al.(2015)
Dif_2
0.988
0.988
Dif
M03955_2.00
Drosophila melanogaster
BGGGAWWTCCCV
BGGGAWWTCCCV
SELEX
Nitta et al.(2015)
Dif_3
0.988
0.988
Dif
M03956_2.00
Drosophila melanogaster
GGRAAWNNNNNNNWTTYCC
GGRAAWNNNNNNNWTTYCC
SELEX
Nitta et al.(2015)
Dif_4
0.988
0.988
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0198608
Rel
80
251
LRIVEEPTNNIIRFRYKCEGRTAGSIPGMNSSSETGKTFPTIEVCNYDGPVIIVVSCVTSDEPFRQHPHWLVSKEEADACKSGIYQKKLPPEERRLVLQKVGIQCAKKLEMRDSLVEREKRNIDPFNAKFDHKDQIDKINRYELRLCYQAFITVGNSKVPLDPIVSSPIYGK
Links
Other
Rel
family TFs
Other
Drosophila sechellia
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Dif
Drosophila melanogaster
FBgn0011274
D
0.988
Dif
Drosophila simulans
FBgn0067525
I
0.982
GG21748
Drosophila erecta
FBgn0113926
I
0.952
GA19867
Drosophila pseudoobscura
FBgn0079863
I
0.874
GL18755
Drosophila persimilis
FBgn0156356
I
0.874
GF15105
Drosophila ananassae
FBgn0092130
I
0.850
GK24830
Drosophila willistoni
FBgn0226789
I
0.820
GI16552
Drosophila mojavensis
FBgn0139300
I
0.760
GJ16233
Drosophila virilis
FBgn0203418
I
0.754
Dif
Drosophila yakuba
FBgn0067450
I
0.743
GH10078
Drosophila grimshawi
FBgn0117559
I
0.743