Alligator_sinensis_CCG000883.1 (Alligator sinensis)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Alligator_sinensis_CCG000883.1 T317730_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RELB
M08161_2.00 		Homo sapiens
NNATTCCCCNN
NNGGGGAATNN		 ChIP-seq
Mathelier et al.(2014)
MA1117.1 		0.801 0.801
RELB
M09347_2.00 		Homo sapiens
VGGGRMTTTSMH
DKSAAAKYCCCB		 Misc
Kulakovskiy et al.(2013)
RELB_HUMAN.H11MO.0.C 		0.801 0.801
RELB
M11227_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELBP50_Q3 		0.801 0.801
Relb
M09352_2.00 		Mus musculus
VGGGRMTTTSMH
DKSAAAKYCCCB		 Misc
Kulakovskiy et al.(2013)
RELB_MOUSE.H11MO.0.C 		0.783 0.783
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG000883.1 Rel 158 326

Links

Other Rel family TFs
Other Alligator sinensis TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000012895 Pelodiscus sinensis ENSPSIG00000012895 I 0.892
RELB Anolis carolinensis ENSACAG00000004079 I 0.861
Ogr08766 Ophisaurus gracilis Ogr08766 I 0.855
Pvit_18473 Pogona vitticeps Pvit_18473 I 0.843
ENSOPRG00000014981 Ochotona princeps ENSOPRG00000014981 I 0.807
ENSAMEG00000012673 Ailuropoda melanoleuca ENSAMEG00000012673 I 0.801
RELB Bos taurus ENSBTAG00000038428 I 0.801
RELB Canis familiaris ENSCAFG00000004597 I 0.801
RELB Cavia porcellus ENSCPOG00000010273 I 0.801
Relb Dipodomys ordii ENSDORG00000003448 I 0.801
RELB Felis catus ENSFCAG00000025715 I 0.801
RELB Homo sapiens ENSG00000104856 D 0.801
RELB Gorilla gorilla ENSGGOG00000003380 I 0.801
RELB Macaca mulatta ENSMMUG00000014153 I 0.801
ENSOARG00000009545 Ovis aries ENSOARG00000009545 I 0.801
RELB Otolemur garnettii ENSOGAG00000012777 I 0.801
ENSPANG00000007219 Papio anubis ENSPANG00000007219 I 0.801
ENSPPYG00000010103 Pongo abelii ENSPPYG00000010103 I 0.801
RELB Pan troglodytes ENSPTRG00000011133 I 0.801
RELB Callithrix jacchus ENSCJAG00000012991 I 0.795
RELB Myotis lucifugus ENSMLUG00000006593 I 0.795
RELB Microcebus murinus ENSMICG00000006991 I 0.789
RELB Monodelphis domestica ENSMODG00000020855 I 0.789
RELB Tursiops truncatus ENSTTRG00000015217 I 0.789
Relb Mus musculus ENSMUSG00000002983 D 0.783
RELB Pteropus vampyrus ENSPVAG00000015952 I 0.783
Relb Rattus norvegicus ENSRNOG00000033235 I 0.783
RELB Equus caballus ENSECAG00000020898 I 0.771
ENSCSAG00000003233 Chlorocebus sabaeus ENSCSAG00000003233 I 0.735
ENSDNOG00000032456 Dasypus novemcinctus ENSDNOG00000032456 I 0.735
RELB Procavia capensis ENSPCAG00000010787 I 0.735
ENSSTOG00000009056 Ictidomys tridecemlineatus ENSSTOG00000009056 I 0.735