CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gww1.1.1.1440.1
(
Pichia stipitis
)
RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02257 (RFX_DNA_binding)
IPR003150
e_gww1.1.1.1440.1
T319030_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gww1.1.1.1440.1
RFX
158
241
LSSDDDPQNYTIPRLSIYKTYYIICQKLILTYPSSSNTTNEQQKLILGQSKLGKLIKLVYPNLLIKRLGSRGESKYNYLGVIWN
Links
Other
RFX
family TFs
Other
Pichia stipitis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PICST_51550
Scheffersomyces stipitis
PICST_51550
N
0.745
CaO19.12059
Candida albicans
CaO19.12059
N
0.734
CaO19.4590
Candida albicans
CaO19.4590
N
0.734
CD36_41920
Candida dubliniensis
CD36_41920
N
0.734
CTRG_00244
Candida tropicalis
CTRG_00244
N
0.731
LELG_04351
Lodderomyces elongisporus
LELG_04351
N
0.731
SPAPADRAFT_155956
Spathaspora passalidarum
SPAPADRAFT_155956
N
0.724
DEHA2D17930g
Debaryomyces hansenii
DEHA2D17930g
N
0.719
G210_1070
Candida maltosa
G210_1070
N
0.715
GNLVRS01_PISO0M04676g
Millerozyma farinosa
GNLVRS01_PISO0M04676g
N
0.705
GNLVRS01_PISO0N04809g
Millerozyma farinosa
GNLVRS01_PISO0N04809g
N
0.704
CORT_0E01340
Candida orthopsilosis
CORT_0E01340
N
0.702
CPAG_03150
Candida parapsilosis
CPAG_03150
N
0.697
PGUG_05232
Candida guilliermondii
PGUG_05232
N
0.678
PGUG_05232
Meyerozyma guilliermondii
PGUG_05232
N
0.678
PICST_78645
Scheffersomyces stipitis
PICST_78645
I
0.654