CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PPA17671
(
Pristionchus pacificus
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00853 (Runt)
IPR013524
PPA17671
T319614_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA17671
Runt
41
137
ASGVEGGCATGESLPDPFLVLLLIPIPDGTQVSVSAANDENPCGEVRNATAVVRNQIAKFNDLRFIGKSGRGKSFHITITVHSSPMHVGTINRAIKL
Links
Other
Runt
family TFs
Other
Pristionchus pacificus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPA17670
Pristionchus pacificus
PPA17670
N
0.876
scaffold962-EXSNAP2012.6
Pristionchus exspectatus
scaffold962-EXSNAP2012.6
N
0.814
scaffold962-EXSNAP2012.8
Pristionchus exspectatus
scaffold962-EXSNAP2012.8
N
0.804