CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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rnt-1
(
Caenorhabditis elegans
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00853 (Runt)
IPR013524
WBGene00004393
T319633_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
B0414.2
Runt
11
140
FIEQQPAPAKTLEKSSSPNILYTALPKHWRSNKSFQEPFYVVLLTPVPDNTEVSIWAGNDEKPCEEVRNEKAKVHRQVAKFNDLRFVGRSGRGRKFHLTIVIHSAPMMVATVKNVIKVTVDGPRDARIPK
Links
Other
Runt
family TFs
Other
Caenorhabditis elegans
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE03996
Caenorhabditis remanei
CRE03996
N
0.977
CBN16462
Caenorhabditis brenneri
CBN16462
N
0.954
CBN20629
Caenorhabditis brenneri
CBN20629
N
0.954