SSLN_0000508301 (Schistocephalus solidus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 SSLN_0000508301 T319851_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smp_174320
M02457_2.00 		Schistosoma mansoni
NNAACCGCARN
NYTGCGGTTNN		 PBM
Weirauch et al.(2014)
pTH8368 		0.754 0.754
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSLN_0000508301-mRNA-1 Runt 60 189

Links

Other Runt family TFs
Other Schistocephalus solidus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DILT_0000572101 Diphyllobothrium latum DILT_0000572101 I 1.000
TTAC_0000783001 Hydatigera taeniaeformis TTAC_0000783001 I 0.946
EmuJ_000490800 Echinococcus multilocularis EmuJ_000490800 I 0.938
HNAJ_0001011401 Hymenolepis nana HNAJ_0001011401 I 0.885
HDID_0000068701 Hymenolepis diminuta HDID_0000068701 I 0.877
HmN_000789900 Hymenolepis microstoma HmN_000789900 I 0.877
HmN_000790000 Hymenolepis microstoma HmN_000790000 I 0.877
HNAJ_0000973501 Hymenolepis nana HNAJ_0000973501 I 0.877
SMTD_0000935101 Schistosoma mattheei SMTD_0000935101 I 0.766
SROB_0000638901 Schistosoma rodhaini SROB_0000638901 I 0.766
A_06411 Schistosoma haematobium A_06411 I 0.762
A_07565 Schistosoma haematobium A_07565 I 0.762
Smp_174320 Schistosoma mansoni Smp_174320 D 0.760
csin105545 Clonorchis sinensis csin105545 I 0.746
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I 0.737
SPER_0000558501 Spirometra erinaceieuropaei SPER_0000558501 I 0.723
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I 0.720
AMAM011616 Anopheles maculatus AMAM011616 I 0.720