CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_03992
(
Cicer arietinum
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02042 (RWP-RK)
IPR003035
Ca_03992
T320905_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_03992
RWP-RK
143
191
LLEFDDIKKHFNVPITLAAKRLNVGLTLLKRRCRELKITRWPHRKLKSL
Links
Other
RWP-RK
family TFs
Other
Cicer arietinum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA06G13540
Glycine max
GLYMA06G13540
N
0.878
GLYMA04G41320
Glycine max
GLYMA04G41320
N
0.796
MTR_3g091700
Medicago truncatula
MTR_3g091700
N
0.796
chr1.CM0033.390.nc
Lotus japonicus
chr1.CM0033.390.nc
N
0.796
VIT_16s0098g01730
Vitis vinifera
VIT_16s0098g01730
N
0.776
Pm019768
Prunus mume
Pm019768
N
0.755
LjSGA_030914.1
Lotus japonicus
LjSGA_030914.1
N
0.750
PRUPE_ppa015130mg
Prunus persica
PRUPE_ppa015130mg
N
0.735
mgf025545m
Mimulus guttatus
mgf025545m
N
0.735
MDP0000141137
Malus domestica
MDP0000141137
N
0.735
MDP0000819497
Malus domestica
MDP0000819497
N
0.735
chr4.CM0131.310.nd
Lotus japonicus
chr4.CM0131.310.nd
N
0.735
Bo2g046220
Brassica oleracea
Bo2g046220
N
0.714
Bra022622
Brassica rapa
Bra022622
N
0.714
30024.m001687
Ricinus communis
30024.m001687
N
0.714
Cagra.0084s0050
Capsella grandiflora
Cagra.0084s0050
N
0.714
Carubv10028317m.g
Capsella rubella
Carubv10028317m.g
N
0.714
gene12898-v1.0-hybrid
Fragaria vesca
gene12898-v1.0-hybrid
N
0.714
Lus10005921.g
Linum usitatissimum
Lus10005921.g
N
0.714
chr1.CM0033.310.nc
Lotus japonicus
chr1.CM0033.310.nc
N
0.714
AMTR_s00057p00091350
Amborella trichopoda
AMTR_s00057p00091350
I
0.703
MLOC_12609
Hordeum vulgare
MLOC_12609
I
0.703