CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_00107
(
Phytophthora capsici
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02042 (RWP-RK)
IPR003035
estExt_fgenesh1_pg.C_00107
T321310_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_00107
RWP-RK
84
121
KRPLAEVANIFGICMTLMKKICRKNGVPRWPHRQIRGL
Links
Other
RWP-RK
family TFs
Other
Phytophthora capsici
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_02170
Phytophthora parasitica
F443_02170
N
0.947
fgenesh_scip_prom.28083.8513
Phytophthora lateralis
fgenesh_scip_prom.28083.8513
N
0.947
HpaG800546
Hyaloperonospora arabidopsidis
HpaG800546
N
0.947
Phyra75938
Phytophthora ramorum
Phyra75938
N
0.947
PITG_05734
Phytophthora infestans
PITG_05734
N
0.947
fgenesh_scip_prom.46568.2994
Phytophthora kernoviae
fgenesh_scip_prom.46568.2994
N
0.921
maker-pve_contig_244-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_244-fgenesh-gene-0.3
N
0.921
snap-piw_contig_1471-abinit-gene-0.10
Pythium iwayamai
snap-piw_contig_1471-abinit-gene-0.10
N
0.895
maker-par_contig_498-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_498-fgenesh-gene-0.0
N
0.763
maker-pag1_scaffold_241-snap-gene-0.8
Pythium aphanidermatum
maker-pag1_scaffold_241-snap-gene-0.8
N
0.737
maker-pag1_scaffold_241-snap-gene-0.5
Pythium aphanidermatum
maker-pag1_scaffold_241-snap-gene-0.5
N
0.735
SPRG_01851
Saprolegnia parasitica
SPRG_01851
N
0.711
HpaG806838
Hyaloperonospora arabidopsidis
HpaG806838
N
0.711
maker-pir_contig_962-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_962-fgenesh-gene-0.0
N
0.711
PYU1_G005004
Pythium ultimum
PYU1_G005004
N
0.711