CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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spe-44
(
Caenorhabditis elegans
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
WBGene00007732
T322109_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
spe-44
M02467_2.00
Caenorhabditis elegans
HHAAYRTTDD
HHAAYRTTDD
PBM
Weirauch et al.(2014)
pTH8983
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.843
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02467_2.00
SAND
54
129
DASPTVPVSCGVVNGKMHLNLFMCPGIHQPCIEVGNDLLSPKQFTIRGDKERQKDWKASIRVGRSSLRTHMEAMTI
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C25G4.4
SAND
74
149
DASPTVPVSCGVVNGKMHLNLFMCPGIHQPCIEVGNDLLSPKQFTIRGDKERQKDWKASIRVGRSSLRTHMEAMTI
Links
Other
SAND
family TFs
Other
Caenorhabditis elegans
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG09220
Caenorhabditis briggsae
CBG09220
I
0.990
CBN08828
Caenorhabditis brenneri
CBN08828
I
0.990
CRE25435
Caenorhabditis remanei
CRE25435
I
0.986
CJA13158
Caenorhabditis japonica
CJA13158
I
0.971