CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10005766m.g
(
Eutrema salsugineum
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01342 (SAND)
IPR000770
Thhalv10005766m.g
T322275_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10005766m
SAND
471
541
ELPDEITVVCNGMEGTYITKFHAIECKCGSCGARKQTPSEWERHTGCRAKKWKYSVKVKGTMLTLEKWIAG
Links
Other
SAND
family TFs
Other
Eutrema salsugineum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0483s0071
Capsella grandiflora
Cagra.0483s0071
N
0.987
Carubv10016636m.g
Capsella rubella
Carubv10016636m.g
N
0.984
Bo6g077950
Brassica oleracea
Bo6g077950
N
0.981
ATX3
Arabidopsis thaliana
AT3G61740
N
0.976
Bra003467
Brassica rapa
Bra003467
N
0.975
scaffold_503436.1
Arabidopsis lyrata
scaffold_503436.1
N
0.969
Bostr.13158s0178
Boechera stricta
Bostr.13158s0178
N
0.964
29742.m001425
Ricinus communis
29742.m001425
N
0.950
Ca_17647
Cicer arietinum
Ca_17647
N
0.844