CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0001206901
(
Gongylonema pulchrum
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01342 (SAND)
IPR000770
GPUH_0001206901
T322336_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0001206901-mRNA-1
SAND
2
74
CLFQVRCGQLVARLHVEKFVCPGIHQPCIELDGELISPKEFTVRANKDKQKDWKGSIRIGKSNMRALMEMKTL
Links
Other
SAND
family TFs
Other
Gongylonema pulchrum
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_03352
Wuchereria bancrofti
WUBG_03352
N
0.977
Bm1869
Brugia malayi
Bm1869
N
0.977
LOAG_00514
Loa loa
LOAG_00514
N
0.977
WBGene00240385
Onchocerca volvulus
WBGene00240385
N
0.977
BTMF_0001647701
Brugia timori
BTMF_0001647701
N
0.977
EEL_0000398501
Elaeophora elaphi
EEL_0000398501
N
0.977
nAv.1.0.1.g02384
Acanthocheilonema viteae
nAv.1.0.1.g02384
N
0.977
nDi.2.2.2.g07282
Dirofilaria immitis
nDi.2.2.2.g07282
N
0.977
nLs.2.1.2.g05829
Litomosoides sigmodontis
nLs.2.1.2.g05829
N
0.977
nOo.2.0.1.g07845
Onchocerca ochengi
nOo.2.0.1.g07845
N
0.977
EVEC_0001107401
Enterobius vermicularis
EVEC_0001107401
N
0.973
ASU_08046
Ascaris suum
ASU_08046
N
0.972
TCLT_0000462301
Thelazia callipaeda
TCLT_0000462301
N
0.972
OFLC_0001085001
Onchocerca flexuosa
OFLC_0001085001
N
0.952
scaffold233-EXSNAP2012.27
Pristionchus exspectatus
scaffold233-EXSNAP2012.27
N
0.946
DME_0000449401
Dracunculus medinensis
DME_0000449401
N
0.938
OESDEN_01187
Oesophagostomum dentatum
OESDEN_01187
N
0.937
SMUV_0000604801
Syphacia muris
SMUV_0000604801
N
0.936
NBR_0000578501
Nippostrongylus brasiliensis
NBR_0000578501
N
0.930
PPA07067
Pristionchus pacificus
PPA07067
N
0.927
L596_g5423
Steinernema carpocapsae
L596_g5423
N
0.920
L892_g19776
Steinernema scapterisci
L892_g19776
N
0.920
ANCDUO_01146
Ancylostoma duodenale
ANCDUO_01146
N
0.917
NECAME_15736
Necator americanus
NECAME_15736
N
0.910
L889_g7801
Steinernema feltiae
L889_g7801
N
0.899
L893_g27010
Steinernema glaseri
L893_g27010
N
0.899
ANCCAN_15895
Ancylostoma caninum
ANCCAN_15895
N
0.896
L898_g20016
Steinernema monticolum
L898_g20016
N
0.890
HCOI01890300
Haemonchus contortus
HCOI01890300
N
0.886
CBN08978
Caenorhabditis brenneri
CBN08978
N
0.885
CBG15998
Caenorhabditis briggsae
CBG15998
N
0.873
CJA01357
Caenorhabditis japonica
CJA01357
N
0.873
CRE16681
Caenorhabditis remanei
CRE16681
N
0.849
PTRK_0000587000
Parastrongyloides trichosuri
PTRK_0000587000
N
0.843