CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_6.327
(
Carica papaya
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
evm.TU.supercontig_6.327
T323474_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_6.327
SBP
73
147
CQADECGKELVDAKAYHRRHKVCERHAKAPVVLVKGVRQRFCQQCSRFHGISEFDNFKRSCRSRLAGHNERRRKL
Links
Other
SBP
family TFs
Other
Carica papaya
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_000084
Theobroma cacao
TCM_000084
N
0.909
VIT_04s0210g00170
Vitis vinifera
VIT_04s0210g00170
N
0.899
GLYMA11G08905
Glycine max
GLYMA11G08905
N
0.894