CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G14790
(
Brachypodium distachyon
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
BRADI2G14790
T323792_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G14790.1
Sigma 70
285
361
LIKHNLRLVLYAINRYYPDMAGGGDGGKFEEVCQAGANGLITAIDRFEPRRGFRLSTYALFWVRHSISRAMAALSSF
Links
Other
Sigma 70
family TFs
Other
Brachypodium distachyon
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_08366
Aegilops tauschii
F775_08366
N
0.754
MLOC_61094
Hordeum vulgare
MLOC_61094
N
0.754
Traes_1AL_0C41C44B1
Triticum aestivum
Traes_1AL_0C41C44B1
N
0.754
TRIUR3_33378
Triticum urartu
TRIUR3_33378
N
0.754
GSMUA_Achr7G24590_001
Musa acuminata
GSMUA_Achr7G24590_001
N
0.739
GRMZM2G077436
Zea mays
GRMZM2G077436
N
0.732
Sb09g030110
Sorghum bicolor
Sb09g030110
N
0.732
Pavir.J13718
Panicum virgatum
Pavir.J13718
N
0.718
BGIOSGA020460
Oryza indica
BGIOSGA020460
N
0.710
OBART05G27520
Oryza barthii
OBART05G27520
N
0.710
OGLUM05G29030
Oryza glumaepatula
OGLUM05G29030
N
0.710
OLONG_028119
Oryza longistaminata
OLONG_028119
N
0.710
OMERI05G23510
Oryza meridionalis
OMERI05G23510
N
0.710
ONIVA05G29570
Oryza nivara
ONIVA05G29570
N
0.710
OPUNC05G25110
Oryza punctata
OPUNC05G25110
N
0.710
ORGLA05G0239100
Oryza glaberrima
ORGLA05G0239100
N
0.710
ORUFI05G29480
Oryza rufipogon
ORUFI05G29480
N
0.710
LPERR05G23180
Leersia perrieri
LPERR05G23180
N
0.704
OB05G35020
Oryza brachyantha
OB05G35020
N
0.704
Si021904m.g
Setaria italica
Si021904m.g
N
0.704