CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CADANGAG00002300
(
Aspergillus niger
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
CADANGAG00002300
T323799_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANGAP00002237
Sigma 70
272
337
ALYHRDRAITMLRELRDRNPNDISDEAIIGCISAAGLEDFDPRPGHKQTSWLHMRAAREMIRLRGG
Links
Other
Sigma 70
family TFs
Other
Aspergillus niger
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.00866_#_478
Aspergillus carbonarius
fgenesh1_pm.00866_#_478
N
0.875
CADAFLAG00002426
Aspergillus flavus
CADAFLAG00002426
N
0.762
CADAORAG00001358
Aspergillus oryzae
CADAORAG00001358
N
0.762
ATEG_04745
Aspergillus terreus
CADATEAG00006678
N
0.762
AFUA_3G12020
Aspergillus fumigatus
CADAFUAG00005449
N
0.754
NFIA_065290
Neosartorya fischeri
CADNFIAG00005873
N
0.754
ACLA_039890
Aspergillus clavatus
CADACLAG00004035
N
0.738
U727_00433932191
Penicillium solitum
U727_00433932191
N
0.730
PDE_05169
Penicillium oxalicum
PDE_05169
N
0.723
PVAR5_3044
Byssochlamys spectabilis
PVAR5_3044
N
0.710