CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g4508
(
Steinernema glaseri
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
L893_g4508
T324322_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g4508.t1
Sigma 70
70
131
MVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAIT
Links
Other
Sigma 70
family TFs
Other
Steinernema glaseri
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_620010
Phytophthora capsici
estExt_fgenesh1_pg.C_620010
N
1.000
AMAM001294
Anopheles maculatus
AMAM001294
N
1.000
D915_15351
Fasciola hepatica
D915_15351
N
0.887
CLEC013695
Cimex lectularius
CLEC013695
N
0.823
TTRE_0000710801
Trichuris trichiura
TTRE_0000710801
N
0.704