CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0001103101
(
Heligmosomoides bakeri
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
HPBE_0001103101
T325722_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0001103101-mRNA-1
SMAD
80
173
RFLRLMRGFDAEDVEVIRKAVESGGVDAKACAPGPPMDERPDDDQPEEDSGLIPQIDRPMSMPYLCCKLWRWKDLQVFYVLGDSEDVPKASSNC
Links
Other
SMAD
family TFs
Other
Heligmosomoides bakeri
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_19967
Ancylostoma duodenale
ANCDUO_19967
N
0.985
TELCIR_20778
Teladorsagia circumcincta
TELCIR_20778
N
0.941
HCOI01584000
Haemonchus contortus
HCOI01584000
N
0.819
TELCIR_17986
Teladorsagia circumcincta
TELCIR_17986
N
0.819
ANCCEY_01929
Ancylostoma ceylanicum
ANCCEY_01929
N
0.783
CRE29609
Caenorhabditis remanei
CRE29609
N
0.771
TELCIR_19586
Teladorsagia circumcincta
TELCIR_19586
N
0.766