CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPRG_03008
(
Saprolegnia parasitica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SPRG_03008
T326147_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPRG_03008T0
Sox
348
414
PPKPVNTFLIFCRQWRKKLMAQNPAASAKEASKLLGDMWQKLTEAQRASYQPLADKENAQRMLEWKR
Links
Other
Sox
family TFs
Other
Saprolegnia parasitica
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pag1_scaffold_427-snap-gene-0.9
Pythium aphanidermatum
maker-pag1_scaffold_427-snap-gene-0.9
N
0.627
maker-pir_contig_55-fgenesh-gene-0.14
Pythium irregulare
maker-pir_contig_55-fgenesh-gene-0.14
N
0.585
maker-piw_contig_544-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_544-fgenesh-gene-0.1
N
0.585
ALNC14_069800
Albugo laibachii
ALNC14_069800
N
0.579
ALNC14_069810
Albugo laibachii
ALNC14_069810
N
0.579
ALNC14_069820
Albugo laibachii
ALNC14_069820
N
0.579
HpaG807420
Hyaloperonospora arabidopsidis
HpaG807420
N
0.575
Phyra94744
Phytophthora ramorum
Phyra94744
N
0.575
Physo143607
Phytophthora sojae
Physo143607
N
0.575
PITG_02043
Phytophthora infestans
PITG_02043
N
0.575
estExt_Genewise1Plus.C_110197
Phytophthora capsici
estExt_Genewise1Plus.C_110197
N
0.575
PYU1_G005731
Pythium ultimum
PYU1_G005731
N
0.572
fgenesh_masked-pve_contig_390-abinit-gene-0.42
Pythium vexans
fgenesh_masked-pve_contig_390-abinit-gene-0.42
N
0.519