CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AACERI_AaceriAGL345W
(
Saccharomycetaceae sp ashbya aceri
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
AACERI_AaceriAGL345W
T326245_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGO13537
Sox
446
483
MKRPLNSFMLYRSALMKALSILKVVKIVTDLVRAVSKE
AGO13537
Sox
546
597
RVPVDPKFSNHTVLAQVITLMWNSESTDCREGFVLFSKVEKNHHHLVYPKYK
Links
Other
Sox
family TFs
Other
Saccharomycetaceae sp ashbya aceri
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_AGL345W
Ashbya gossypii
AGOS_AGL345W
N
0.718
SAKL0H00726g
Lachancea kluyveri
SAKL0H00726g
N
0.544
Kwal_9519
Kluyveromyces waltii
Kwal_9519
N
0.506
LALA0_S10e00254g
Lachancea lanzarotensis
LALA0_S10e00254g
N
0.501
BN7_5943
Wickerhamomyces ciferrii
BN7_5943
N
0.492
PAS_chr3_1149
Komagataella pastoris
PAS_chr3_1149
N
0.451
XP_002492281.1
Pichia pastoris
XP_002492281.1
N
0.451
KUCA_T00004799001
Kuraishia capsulata
KUCA_T00004799001
N
0.443
HPODL_02662
Ogataea parapolymorpha
HPODL_02662
N
0.437
A1Q1_02593
Trichosporon asahii
A1Q1_02593
N
0.430
AWRI1499_2837
Brettanomyces bruxellensis
AWRI1499_2837
N
0.424
sr12520
Sporisorium reilianum
sr12520
N
0.423