CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGI_10028136
(
Crassostrea gigas
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CGI_10028136
T327027_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKC41956
Sox
20
89
PKRATSAYFFFLSKMREDSKKAGKPITKIAEFTKECSAKWAKMNEKDKEPFAKKALTDKNRYDAEMAIYK
EKC41956
Sox
99
165
PKRPQSAYFCFLADFRLKMKGKDIDHKEIIKMAGEAWRNLDDNEKKPFEKLAQKEQEKYEQALSDWR
Links
Other
Sox
family TFs
Other
Crassostrea gigas
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB010807
Biomphalaria glabrata
BGLB010807
N
0.497
Ocbimv22013621m.g
Octopus bimaculoides
Ocbimv22013621m.g
N
0.461
Ocbimv22030504m.g
Octopus bimaculoides
Ocbimv22030504m.g
N
0.439