CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_221844
(
Daphnia pulex
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
DAPPUDRAFT_221844
T327317_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX87125
Sox
195
263
PKKPLTSYMLFYMEQKDAVLEKQPGLGMTELSKIIAKMYHELSDRNKTKYSELAEKEKEAYQEKMKKFM
EFX87125
Sox
282
348
PPKPPTPFKLFSDEKMPKFVGQGMSLTEAREKCRDAYKELKDKQKLKWIYQALEQEPEFNEEMEKFK
EFX87125
Sox
380
446
EKPPNSGYSLFSKKLLSSNSLKQFETKERMAEISRLWRELSDEEKTSYNDKATQMNYAYKIKYASYL
EFX87125
Sox
519
585
IQKPNSSLQMFCNSNMDKYSSKHPKLTKQELKRLMAKEFAKLSEEKKKVYGNMALKTKNEMSATSKK
Links
Other
Sox
family TFs
Other
Daphnia pulex
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DAPPUDRAFT_303621
Daphnia pulex
DAPPUDRAFT_303621
N
0.716