CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCING00000002208
(
Ciona intestinalis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSCING00000002208
T327685_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000004514
Sox
302
368
KKRKASGYNLWSSKMRKQVATQFPGLQFGDVSKKLGDLWKKIPEKEKQMWKFRSVKMVNQLERLHSS
Links
Other
Sox
family TFs
Other
Ciona intestinalis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAVG00000006236
Ciona savignyi
ENSCSAVG00000006236
N
0.734
BXY_0575000
Bursaphelenchus xylophilus
BXY_0575000
N
0.441
WUBG_00348
Wuchereria bancrofti
WUBG_00348
N
0.431
Bm2393
Brugia malayi
Bm2393
N
0.431
LOAG_15875
Loa loa
LOAG_15875
N
0.431
WBGene00238178
Onchocerca volvulus
WBGene00238178
N
0.431
GPUH_0001659301
Gongylonema pulchrum
GPUH_0001659301
N
0.431
nDi.2.2.2.g06671
Dirofilaria immitis
nDi.2.2.2.g06671
N
0.431
nDi.2.2.2.g10298
Dirofilaria immitis
nDi.2.2.2.g10298
N
0.431
nLs.2.1.2.g08566
Litomosoides sigmodontis
nLs.2.1.2.g08566
N
0.431
nOo.2.0.1.g07918
Onchocerca ochengi
nOo.2.0.1.g07918
N
0.431
TCLT_0000189901
Thelazia callipaeda
TCLT_0000189901
N
0.431
ASIM_0001613301
Anisakis simplex
ASIM_0001613301
N
0.420
ASU_00939
Ascaris suum
ASU_00939
N
0.420
SMUV_0000135001
Syphacia muris
SMUV_0000135001
N
0.420
ANCCAN_19939
Ancylostoma caninum
ANCCAN_19939
N
0.416