CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSXMAG00000004978
(
Xiphophorus maculatus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSXMAG00000004978
T329390_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000005029
Sox
1616
1678
TVAPVLYCNTNFPQLKQQYPDWSTRVKQITKLWRKASSQDRAPFVQKARDNRAAQRINKAQLS
Links
Other
Sox
family TFs
Other
Xiphophorus maculatus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPFOG00000001796
Poecilia formosa
ENSPFOG00000001796
N
0.650
KMT2C
Takifugu rubripes
ENSTRUG00000017487
N
0.638
KMT2C
Oryzias latipes
ENSORLG00000003857
N
0.609
ENSTNIG00000013539
Tetraodon nigroviridis
ENSTNIG00000013539
N
0.602
ENSAMXG00000006567
Astyanax mexicanus
ENSAMXG00000006567
N
0.514