CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_10087
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_10087
T330025_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERZ98898
Sox
50
118
PKRSPNAFLVCRRNVHEEATRKGTFNMRVISKVTGILWKNASAEEKDVYKKLADRVYEIHYKRTSSIYK
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_23582
Rhizophagus irregularis
GLOINDRAFT_23582
N
0.597
GLOINDRAFT_341245
Rhizophagus irregularis
GLOINDRAFT_341245
N
0.577
GLOINDRAFT_13874
Rhizophagus irregularis
GLOINDRAFT_13874
N
0.565
GLOINDRAFT_15291
Rhizophagus irregularis
GLOINDRAFT_15291
N
0.519
GLOINDRAFT_346310
Rhizophagus irregularis
GLOINDRAFT_346310
I
0.515
GLOINDRAFT_44351
Rhizophagus irregularis
GLOINDRAFT_44351
I
0.504
GLOINDRAFT_30433
Rhizophagus irregularis
GLOINDRAFT_30433
N
0.489
GLOINDRAFT_18435
Rhizophagus irregularis
GLOINDRAFT_18435
N
0.467
GLOINDRAFT_327467
Rhizophagus irregularis
GLOINDRAFT_327467
N
0.460
GLOINDRAFT_35923
Rhizophagus irregularis
GLOINDRAFT_35923
N
0.436
GLOINDRAFT_27214
Rhizophagus irregularis
GLOINDRAFT_27214
N
0.432