CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_104797
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_104797
T330026_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA23680
Sox
792
860
PKRPMNAFIIFSSERRPELQKNDQNMQTAQVSKILGDEWRTMDNERKEHYNERARQLKEEFKQTNPGFI
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MELLADRAFT_114973
Melampsora laricipopulina
MELLADRAFT_114973
N
0.482
PGTG_17717
Puccinia graminis
PGTG_17717
N
0.482
PTTG_07563
Puccinia triticina
PTTG_07563
N
0.455
HYDPIDRAFT_154960
Hydnomerulius pinastri
HYDPIDRAFT_154960
N
0.450
PAXINDRAFT_180477
Paxillus involutus
PAXINDRAFT_180477
N
0.450
PAXRUDRAFT_824795
Paxillus rubicundulus
PAXRUDRAFT_824795
N
0.450
V565_029720
Rhizoctonia solani
V565_029720
N
0.448
BN946_scf184603.g4
Trametes cinnabarina
BN946_scf184603.g4
N
0.442
CC1G_05834
Coprinopsis cinerea
CC1G_05834
N
0.442
DICSQDRAFT_139297
Dichomitus squalens
DICSQDRAFT_139297
N
0.442
FIBRA_06439
Fibroporia radiculosa
FIBRA_06439
N
0.442
FOMPIDRAFT_1062542
Fomitopsis pinicola
FOMPIDRAFT_1062542
N
0.442
POSPLDRAFT_103612
Postia placenta
POSPLDRAFT_103612
N
0.442
M404DRAFT_20272
Pisolithus tinctorius
M404DRAFT_20272
N
0.439
SCLCIDRAFT_335403
Scleroderma citrinum
SCLCIDRAFT_335403
N
0.439
GYMLUDRAFT_76072
Gymnopus luxurians
GYMLUDRAFT_76072
N
0.436
M378DRAFT_178427
Amanita muscaria
M378DRAFT_178427
N
0.436
SCHCODRAFT_258750
Schizophyllum commune
SCHCODRAFT_258750
N
0.434
L798_14304
Zootermopsis nevadensis
L798_14304
I
0.431
CERSUDRAFT_109878
Ceriporiopsis subvermispora
CERSUDRAFT_109878
N
0.430
HETIRDRAFT_411410
Heterobasidion irregulare
HETIRDRAFT_411410
N
0.430
JAAARDRAFT_50784
Jaapia argillacea
JAAARDRAFT_50784
N
0.430
PIIN_02847
Piriformospora indica
PIIN_02847
N
0.430
SERLA73DRAFT_162951
Serpula lacrymans
SERLA73DRAFT_162951
N
0.430
fgenesh3_kg.16__43__0_0_CCPB1386.b1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.16__43__0_0_CCPB1386.b1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
0.430
fgenesh1_pg.scaffold_35000054
Monosiga brevicollis
fgenesh1_pg.scaffold_35000054
I
0.429
Moror_4096
Moniliophthora roreri
Moror_4096
I
0.424
AGABI2DRAFT_196139
Agaricus bisporus
AGABI2DRAFT_196139
N
0.423
GALMADRAFT_251818
Galerina marginata
GALMADRAFT_251818
N
0.423
GLOTRDRAFT_125036
Gloeophyllum trabeum
GLOTRDRAFT_125036
N
0.423
K443DRAFT_678919
Laccaria amethystina
K443DRAFT_678919
N
0.423
M378DRAFT_379148
Amanita muscaria
M378DRAFT_379148
N
0.423
M413DRAFT_31731
Hebeloma cylindrosporum
M413DRAFT_31731
N
0.423
Moror_8640
Moniliophthora roreri
Moror_8640
N
0.423
PHACADRAFT_23667
Phanerochaete carnosa
PHACADRAFT_23667
N
0.423
PHLGIDRAFT_130081
Phlebiopsis gigantea
PHLGIDRAFT_130081
N
0.423
PILCRDRAFT_306245
Piloderma croceum
PILCRDRAFT_306245
N
0.423
PLEOSDRAFT_35687
Pleurotus ostreatus
PLEOSDRAFT_35687
N
0.423
PLICRDRAFT_179987
Plicaturopsis crispa
PLICRDRAFT_179987
N
0.423
V565_060950
Rhizoctonia solani
V565_060950
N
0.423
fgenesh1_pg.C_scaffold_14000043
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_14000043
I
0.417