CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOTRDRAFT_70334
(
Gloeophyllum trabeum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOTRDRAFT_70334
T330240_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPQ59154
Sox
299
368
PKLAPSAWQLYFTDWIQRHQATSDRKLNVAQAAKEAGQEYAGLSAEEKEPYKRKSQALKDAREREYDAYI
EPQ59154
Sox
403
475
PKKPLSAYFMFLQRIRSDPELVKEVFGDETETTKQSVLAAHKWRSMTDDERKPFLAQAEQEKMEYEAARRLYE
Links
Other
Sox
family TFs
Other
Gloeophyllum trabeum
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DICSQDRAFT_161203
Dichomitus squalens
DICSQDRAFT_161203
N
0.665
K443DRAFT_675725
Laccaria amethystina
K443DRAFT_675725
N
0.662
LACBIDRAFT_311571
Laccaria bicolor
LACBIDRAFT_311571
N
0.662
CY34DRAFT_800204
Suillus luteus
CY34DRAFT_800204
N
0.661
SCLCIDRAFT_1209153
Scleroderma citrinum
SCLCIDRAFT_1209153
N
0.655
CERSUDRAFT_111079
Ceriporiopsis subvermispora
CERSUDRAFT_111079
N
0.653
FIBRA_08488
Fibroporia radiculosa
FIBRA_08488
N
0.652
PISMIDRAFT_89773
Pisolithus microcarpus
PISMIDRAFT_89773
N
0.650
JAAARDRAFT_116407
Jaapia argillacea
JAAARDRAFT_116407
N
0.644
M404DRAFT_124276
Pisolithus tinctorius
M404DRAFT_124276
N
0.642
AGABI2DRAFT_188638
Agaricus bisporus
AGABI2DRAFT_188638
N
0.638
BN946_scf185015.g92
Trametes cinnabarina
BN946_scf185015.g92
N
0.637
PILCRDRAFT_32440
Piloderma croceum
PILCRDRAFT_32440
N
0.635
PAXRUDRAFT_129737
Paxillus rubicundulus
PAXRUDRAFT_129737
N
0.619
CC1G_01334
Coprinopsis cinerea
CC1G_01334
N
0.615
M413DRAFT_65005
Hebeloma cylindrosporum
M413DRAFT_65005
N
0.613
Moror_13892
Moniliophthora roreri
Moror_13892
N
0.612
PHACADRAFT_249698
Phanerochaete carnosa
PHACADRAFT_249698
N
0.612
SERLA73DRAFT_177720
Serpula lacrymans
SERLA73DRAFT_177720
N
0.612
GALMADRAFT_236555
Galerina marginata
GALMADRAFT_236555
N
0.611
HETIRDRAFT_237963
Heterobasidion irregulare
HETIRDRAFT_237963
N
0.604
fgenesh2_pg.C_scaffold_4000344
Heterobasidion annosum
fgenesh2_pg.C_scaffold_4000344
N
0.604
FOMPIDRAFT_1025562
Fomitopsis pinicola
FOMPIDRAFT_1025562
N
0.600
SCHCODRAFT_255141
Schizophyllum commune
SCHCODRAFT_255141
N
0.598
PHLGIDRAFT_81249
Phlebiopsis gigantea
PHLGIDRAFT_81249
N
0.597
PLEOSDRAFT_27233
Pleurotus ostreatus
PLEOSDRAFT_27233
N
0.595
M378DRAFT_156363
Amanita muscaria
M378DRAFT_156363
N
0.566
M408DRAFT_74753
Serendipita vermifera
M408DRAFT_74753
N
0.495
PIIN_05647
Piriformospora indica
PIIN_05647
N
0.473
M408DRAFT_308571
Serendipita vermifera
M408DRAFT_308571
N
0.469
CNA04270
Cryptococcus neoformans
CNA04270
N
0.418
L804_02037
Cryptococcus gattii
L804_02037
N
0.418
BOTBODRAFT_37556
Botryobasidium botryosum
BOTBODRAFT_37556
N
0.415