CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M408DRAFT_52405
(
Serendipita vermifera
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
M408DRAFT_52405
T331043_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM33047
Sox
1
63
PKRPMNAFMIFARKRRPEVAADNPNLRTGEISKLLSAEWKAIDTESKQFYLTKAKELKENFTS
Links
Other
Sox
family TFs
Other
Serendipita vermifera
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PIIN_02847
Piriformospora indica
PIIN_02847
N
0.638
JAAARDRAFT_50784
Jaapia argillacea
JAAARDRAFT_50784
N
0.593
PAXRUDRAFT_824795
Paxillus rubicundulus
PAXRUDRAFT_824795
N
0.584
CERSUDRAFT_109878
Ceriporiopsis subvermispora
CERSUDRAFT_109878
N
0.582
GLOTRDRAFT_125036
Gloeophyllum trabeum
GLOTRDRAFT_125036
N
0.578
PHACADRAFT_23667
Phanerochaete carnosa
PHACADRAFT_23667
N
0.567
PHLGIDRAFT_130081
Phlebiopsis gigantea
PHLGIDRAFT_130081
N
0.567
HETIRDRAFT_411410
Heterobasidion irregulare
HETIRDRAFT_411410
N
0.558
fgenesh3_kg.16__43__0_0_CCPB1386.b1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.16__43__0_0_CCPB1386.b1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
0.558
AGABI2DRAFT_196139
Agaricus bisporus
AGABI2DRAFT_196139
N
0.557
BN946_scf184603.g4
Trametes cinnabarina
BN946_scf184603.g4
N
0.557
DICSQDRAFT_139297
Dichomitus squalens
DICSQDRAFT_139297
N
0.557
PAXINDRAFT_180477
Paxillus involutus
PAXINDRAFT_180477
N
0.557
POSPLDRAFT_103612
Postia placenta
POSPLDRAFT_103612
N
0.557
SERLA73DRAFT_162951
Serpula lacrymans
SERLA73DRAFT_162951
N
0.556
PLEOSDRAFT_35687
Pleurotus ostreatus
PLEOSDRAFT_35687
N
0.549
PLICRDRAFT_179987
Plicaturopsis crispa
PLICRDRAFT_179987
N
0.549
FIBRA_06439
Fibroporia radiculosa
FIBRA_06439
N
0.548
SCHCODRAFT_258750
Schizophyllum commune
SCHCODRAFT_258750
N
0.546
M404DRAFT_20272
Pisolithus tinctorius
M404DRAFT_20272
N
0.545
V565_029720
Rhizoctonia solani
V565_029720
N
0.531
GALMADRAFT_251818
Galerina marginata
GALMADRAFT_251818
N
0.530
HYDPIDRAFT_154960
Hydnomerulius pinastri
HYDPIDRAFT_154960
N
0.530
M378DRAFT_178427
Amanita muscaria
M378DRAFT_178427
N
0.530
Moror_8640
Moniliophthora roreri
Moror_8640
N
0.530
PILCRDRAFT_306245
Piloderma croceum
PILCRDRAFT_306245
N
0.530
SCLCIDRAFT_335403
Scleroderma citrinum
SCLCIDRAFT_335403
N
0.528
GYMLUDRAFT_76072
Gymnopus luxurians
GYMLUDRAFT_76072
N
0.522
K443DRAFT_678919
Laccaria amethystina
K443DRAFT_678919
N
0.522
M413DRAFT_31731
Hebeloma cylindrosporum
M413DRAFT_31731
N
0.522
FOMPIDRAFT_1062542
Fomitopsis pinicola
FOMPIDRAFT_1062542
N
0.521
CY34DRAFT_106474
Suillus luteus
CY34DRAFT_106474
N
0.518
V565_060950
Rhizoctonia solani
V565_060950
N
0.518
CC1G_05834
Coprinopsis cinerea
CC1G_05834
N
0.511
BOTBODRAFT_575815
Botryobasidium botryosum
BOTBODRAFT_575815
N
0.490
M422DRAFT_276978
Sphaerobolus stellatus
M422DRAFT_276978
N
0.488
M378DRAFT_379148
Amanita muscaria
M378DRAFT_379148
N
0.486
LotgiG100217
Lottia gigantea
LotgiG100217
I
0.453
DACRYDRAFT_118397
Dacryopinax sp
DACRYDRAFT_118397
N
0.452
YQE_08560
Dendroctonus ponderosae
YQE_08560
I
0.452
PGTG_17717
Puccinia graminis
PGTG_17717
N
0.449
PTTG_07563
Puccinia triticina
PTTG_07563
N
0.449
M407DRAFT_17636
Tulasnella calospora
M407DRAFT_17636
I
0.442
MELLADRAFT_114973
Melampsora laricipopulina
MELLADRAFT_114973
N
0.441
AMEM012787
Anopheles merus
AMEM012787
I
0.430
PHUM605170
Pediculus humanus
PHUM605170
I
0.427
EFV48447
Trichinella spiralis
EFV48447
I
0.421
HelroG148142
Helobdella robusta
HelroG148142
I
0.421
NECAME_00080
Necator americanus
NECAME_00080
I
0.421
ENSPTRG00000005969
Pan troglodytes
ENSPTRG00000005969
I
0.420
CpipJ_CPIJ017659
Culex pipiens
CpipJ_CPIJ017659
I
0.419
CPIJ017659
Culex quinquefasciatus
CPIJ017659
I
0.419
MESCA009852
Megaselia scalaris
MESCA009852
I
0.419
AALB009865
Anopheles albimanus
AALB009865
I
0.419
AARA005393
Anopheles arabiensis
AARA005393
I
0.419
ACUA026638
Anopheles culicifacies
ACUA026638
I
0.419
ADIR005633
Anopheles dirus
ADIR005633
I
0.419
AEPI010515
Anopheles epiroticus
AEPI010515
I
0.419
AFUN010196
Anopheles funestus
AFUN010196
I
0.419
AMEC008804
Anopheles melas
AMEC008804
I
0.419
AMIN009304
Anopheles minimus
AMIN009304
I
0.419
Hba_07528
Heterorhabditis bacteriophora
Hba_07528
N
0.419
ACEP10859
Atta cephalotes
ACEP10859
I
0.415
DAPPUDRAFT_37735
Daphnia pulex
DAPPUDRAFT_37735
I
0.415
ENSLOCG00000004648
Lepisosteus oculatus
ENSLOCG00000004648
I
0.415
ENSOARG00000009998
Ovis aries
ENSOARG00000009998
I
0.415
SOX3
Pteropus vampyrus
ENSPVAG00000003166
I
0.415
L798_12045
Zootermopsis nevadensis
L798_12045
I
0.415
NEMVEDRAFT_v1g122926
Nematostella vectensis
NEMVEDRAFT_v1g122926
I
0.415
RPRC014334
Rhodnius prolixus
RPRC014334
I
0.415
SINV19744
Solenopsis invicta
SINV19744
I
0.415
CLEC006959
Cimex lectularius
CLEC006959
I
0.415
genemark-nMf.1.1.scaf16788-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf16788-processed-gene-0.1
I
0.415