SKUD_152802 (Saccharomyces kudriavzevii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 SKUD_152802 T332592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF2
M00069_2.00 		Saccharomyces cerevisiae
NNCTCTAGASN
NSTCTAGAGNN		 PBM
Badis et al.(2008)
ABF2_2116 		0.639 0.868
ABF2
M07497_2.00 		Saccharomyces cerevisiae
TCTAGAN
NTCTAGA		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0266.1 		0.639 0.868
ABF2
M08605_2.00 		Saccharomyces cerevisiae
TCTAGAN
NTCTAGA		 Misc
DeBoer et al.(2011)
YMR072W_541 		0.639 0.868
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT41931 Sox 45 113
EJT41931 Sox 118 184

Links

Other Sox family TFs
Other Saccharomyces kudriavzevii TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SU7_2538 Saccharomyces arboricola SU7_2538 I 0.704
17027_YMR072W Saccharomyces paradoxus 17027_YMR072W I 0.660
ABF2 Saccharomyces cerevisiae YMR072W D 0.639
16668_YMR072W Saccharomyces mikatae 16668_YMR072W I 0.636
18434_YMR072W Saccharomyces bayanus 18434_YMR072W I 0.625