CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPU_005372
(
Strongylocentrotus purpuratus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SPU_005372
T332739_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPU_005372-tr
Sox
419
487
PRPPSSAYAMFLAEQREGYRESHPEVVGRKVSSLLGKMWTGLPPDVKKRYLDMEKKDKERYIKEIKEYQ
Links
Other
Sox
family TFs
Other
Strongylocentrotus purpuratus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG402018896
Solanum tuberosum
PGSC0003DMG402018896
N
0.436
chr5.CM0260.560.nd
Lotus japonicus
chr5.CM0260.560.nd
N
0.435
PDK_20s1400562g001
Phoenix dactylifera
PDK_20s1400562g001
N
0.435