Thaps6683 (Thalassiosira pseudonana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Thaps6683 T332939_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.450 0.377
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.450 0.377
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.450 0.333
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.450 0.333
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps6683 Sox 24 102

Links

Other Sox family TFs
Other Thalassiosira pseudonana TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPUR_07262 Claviceps purpurea CPUR_07262 I 0.489
MAC_03215 Metarhizium acridum MAC_03215 I 0.489
MAJ_00874 Metarhizium majus MAJ_00874 I 0.489
MAM_02065 Metarhizium album MAM_02065 I 0.489
MANI_001749 Metarhizium anisopliae MANI_001749 I 0.489
MBR_03233 Metarhizium brunneum MBR_03233 I 0.489
MGU_02963 Metarhizium guizhouense MGU_02963 I 0.489
X797_004147 Metarhizium robertsii X797_004147 I 0.489
CAGL0H08541g Candida glabrata CAGL0H08541g I 0.468
KAFR_0G01620 Kazachstania africana KAFR_0G01620 I 0.468
KNAG_0J02470 Kazachstania naganishii KNAG_0J02470 I 0.468
ATEG_04695 Aspergillus terreus CADATEAG00010213 I 0.458
F503_07006 Ophiostoma piceae uamh F503_07006 I 0.458
MBM_05761 Marssonina brunnea MBM_05761 I 0.458
MGG_04489 Magnaporthe oryzae MGG_04489 I 0.458
SAPIO_CDS3210 Scedosporium apiospermum SAPIO_CDS3210 I 0.458
SMAC_04223 Sordaria macrospora SMAC_04223 I 0.458
UV8b_6830 Ustilaginoidea virens UV8b_6830 I 0.458
NCAS_0A11010 Naumovozyma castellii NCAS_0A11010 I 0.456
Scas_Contig667.17 Saccharomyces castellii Scas_Contig667.17 I 0.456
G210_1137 Candida maltosa G210_1137 I 0.450
KLLA0_B12056g Kluyveromyces lactis KLLA0_B12056g I 0.450
KLTH0E14850g Lachancea thermotolerans KLTH0E14850g I 0.450
KNAG_0H00800 Kazachstania naganishii KNAG_0H00800 I 0.450
LALA0_S09e03686g Lachancea lanzarotensis LALA0_S09e03686g I 0.450
LELG_04337 Lodderomyces elongisporus LELG_04337 I 0.450
PDE_04795 Penicillium oxalicum PDE_04795 I 0.450
SBOR_5988 Sclerotinia borealis SBOR_5988 I 0.450
SKUD_180604 Saccharomyces kudriavzevii SKUD_180604 I 0.450
SKUD_201106 Saccharomyces kudriavzevii SKUD_201106 I 0.450
SU7_0186 Saccharomyces arboricola SU7_0186 I 0.450
SU7_3651 Saccharomyces arboricola SU7_3651 I 0.450
TBLA_0I02240 Tetrapisispora blattae TBLA_0I02240 I 0.450
TDEL_0C04750 Torulaspora delbrueckii TDEL_0C04750 I 0.450
NHP6B Saccharomyces cerevisiae YBR089C-A D 0.450
NHP6A Saccharomyces cerevisiae YPR052C D 0.450
ZBAI_00368 Zygosaccharomyces bailii ZBAI_00368 I 0.450
ZBAI_05520 Zygosaccharomyces bailii ZBAI_05520 I 0.450
ZYRO0C15752g Zygosaccharomyces rouxii ZYRO0C15752g I 0.450
1377_YBR089C-A Saccharomyces paradoxus 1377_YBR089C-A I 0.450
2032_YBR089C-A Saccharomyces bayanus 2032_YBR089C-A I 0.450
22477_YPR052C Saccharomyces mikatae 22477_YPR052C I 0.450
25751_YPR052C Saccharomyces bayanus 25751_YPR052C I 0.450
906_YBR089C-A Saccharomyces mikatae 906_YBR089C-A I 0.450
KLTH0E14850g Kluyveromyces thermotolerans KLTH0E14850g I 0.450
Kwal_12539 Kluyveromyces waltii Kwal_12539 I 0.450
SAKL0B07150g Lachancea kluyveri SAKL0B07150g I 0.450
estExt_Genewise1Plus.C_11422 Mucor circinelloides estExt_Genewise1Plus.C_11422 I 0.448
H072_4754 Dactylellina haptotyla H072_4754 I 0.443
Mycgr3G90433 Zymoseptoria tritici Mycgr3G90433 I 0.443
fgenesh1_pg.C_chr_2000123 Mycosphaerella graminicola fgenesh1_pg.C_chr_2000123 I 0.443
NDAI_0A05290 Naumovozyma dairenensis NDAI_0A05290 I 0.439
estExt_Genewise1.C_20300 Phycomyces blakesleeanus estExt_Genewise1.C_20300 I 0.439
TPHA_0M01480 Tetrapisispora phaffii TPHA_0M01480 I 0.436
AWRI1499_3752 Brettanomyces bruxellensis AWRI1499_3752 I 0.434
HPODL_03671 Ogataea parapolymorpha HPODL_03671 I 0.434
KUCA_T00001555001 Kuraishia capsulata KUCA_T00001555001 I 0.434
fgeneshDP_kg.C_scaffold_625000001 Dictyostelium purpureum fgeneshDP_kg.C_scaffold_625000001 I 0.432
fgeneshDP_kg.C_scaffold_93000006 Dictyostelium purpureum fgeneshDP_kg.C_scaffold_93000006 I 0.432
AOL_s00043g650 Arthrobotrys oligospora AOL_s00043g650 I 0.431
A1O3_03664 Capronia epimyces A1O3_03664 I 0.429
MCYG_05548 Microsporum canis MCYG_05548 I 0.428
ARB_02895 Arthroderma benhamiae ARB_02895 I 0.428
H102_01953 Trichophyton rubrum H102_01953 I 0.428
H105_01968 Trichophyton soudanense H105_01968 I 0.428
MCYG_05548 Arthroderma otae MCYG_05548 I 0.428
MGYG_02637 Microsporum gypseum MGYG_02637 I 0.428
TESG_06912 Trichophyton tonsurans TESG_06912 I 0.428
TRV_07738 Trichophyton verrucosum TRV_07738 I 0.428
nhp6 Schizosaccharomyces pombe SPAC57A10.09c I 0.427
PGUG_05245 Candida guilliermondii PGUG_05245 I 0.426
PGUG_05245 Meyerozyma guilliermondii PGUG_05245 I 0.426
CIMG_03667 Coccidioides immitis CIMG_03667 I 0.424
VDBG_06173 Verticillium albo atrum VDBG_06173 I 0.424
A1O5_02172 Cladophialophora psammophila A1O5_02172 I 0.424
A1O7_07623 Cladophialophora yegresii A1O7_07623 I 0.424
ACRE_009770 Acremonium chrysogenum ACRE_009770 I 0.424
BBA_04234 Beauveria bassiana BBA_04234 I 0.424
BDDG_06343 Blastomyces dermatitidis BDDG_06343 I 0.424
AFUA_3G11610 Aspergillus fumigatus CADAFUAG00005351 I 0.424
NFIA_065700 Neosartorya fischeri CADNFIAG00006255 I 0.424
CCM_02275 Cordyceps militaris CCM_02275 I 0.424
CFIO01_02023 Colletotrichum fioriniae CFIO01_02023 I 0.424
CGGC5_4927 Colletotrichum gloeosporioides CGGC5_4927 I 0.424
CH063_13936 Colletotrichum higginsianum CH063_13936 I 0.424
CHGG_02718 Chaetomium globosum CHGG_02718 I 0.424
Cob_05549 Colletotrichum orbiculare Cob_05549 I 0.424
CPC735_006120 Coccidioides posadasii CPC735_006120 I 0.424
CSUB01_03820 Colletotrichum sublineola CSUB01_03820 I 0.424
CTHT_0010300 Chaetomium thermophilum CTHT_0010300 I 0.424
FFUJ_00897 Fusarium fujikuroi FFUJ_00897 I 0.424
FGRRES_00385 Fusarium graminearum FGRRES_00385 I 0.424
FOXG_00672 Fusarium oxysporum FOXG_00672 I 0.424
FPSE_00047 Fusarium pseudograminearum FPSE_00047 I 0.424
FVEG_00840 Fusarium verticillioides FVEG_00840 I 0.424
G647_02460 Cladophialophora carrionii G647_02460 I 0.424
GGTG_09659 Gaeumannomyces graminis GGTG_09659 I 0.424
GLRG_04072 Colletotrichum graminicola GLRG_04072 I 0.424
GMDG_00086 Pseudogymnoascus destructans GMDG_00086 I 0.424
HCBG_06756 Histoplasma capsulatum HCBG_06756 I 0.424
HMPREF1120_01828 Exophiala dermatitidis HMPREF1120_01828 I 0.424
HMPREF1624_01793 Sporothrix schenckii HMPREF1624_01793 I 0.424
MAPG_02686 Magnaporthe poae MAPG_02686 I 0.424
MYCTH_2296547 Myceliophthora thermophila MYCTH_2296547 I 0.424
NechaG73395 Fusarium solani NechaG73395 I 0.424
NEUTE1DRAFT_118965 Neurospora tetrasperma NEUTE1DRAFT_118965 I 0.424
OCS_02580 Ophiocordyceps sinensis OCS_02580 I 0.424
OIDMADRAFT_53375 Oidiodendron maius OIDMADRAFT_53375 I 0.424
PAAG_01986 Paracoccidioides sp lutzii PAAG_01986 I 0.424
PABG_02251 Paracoccidioides brasiliensis PABG_02251 I 0.424
PFICI_00741 Pestalotiopsis fici PFICI_00741 I 0.424
PODANS_1_14230 Podospora anserina PODANS_1_14230 I 0.424
PV04_08099 Capronia semiimmersa PV04_08099 I 0.424
PV05_08806 Exophiala xenobiotica PV05_08806 I 0.424
PV06_10198 Exophiala oligosperma PV06_10198 I 0.424
PV07_11822 Cladophialophora immunda PV07_11822 I 0.424
PV08_09792 Exophiala spinifera PV08_09792 I 0.424
S40285_00704 Stachybotrys chlorohalonata S40285_00704 I 0.424
S40288_08316 Stachybotrys chartarum S40288_08316 I 0.424
SPBR_08754 Sporothrix brasiliensis SPBR_08754 I 0.424
THITE_126111 Thielavia terrestris THITE_126111 I 0.424
TRIATDRAFT_259074 Trichoderma atroviride TRIATDRAFT_259074 I 0.424
TRIREDRAFT_3007 Trichoderma reesei TRIREDRAFT_3007 I 0.424
TRIVIDRAFT_217092 Trichoderma virens TRIVIDRAFT_217092 I 0.424
UCREL1_7266 Eutypa lata UCREL1_7266 I 0.424
UCRPA7_2040 Togninia minima UCRPA7_2040 I 0.424
UREG_07427 Uncinocarpus reesii UREG_07427 I 0.424
V499_06692 Pseudogymnoascus pannorum V499_06692 I 0.424
VDAG_03330 Verticillium dahliae VDAG_03330 I 0.424
VDBG_06173 Verticillium alfalfae VDBG_06173 I 0.424
Z517_03232 Fonsecaea pedrosoi Z517_03232 I 0.424
Z518_06904 Rhinocladiella mackenziei Z518_06904 I 0.424
Z519_01307 Cladophialophora bantiana Z519_01307 I 0.424
fgenesh1_kg.sca_1_chr1_3_0000051 Nectria haematococca fgenesh1_kg.sca_1_chr1_3_0000051 I 0.424
fgenesh3_kg.24__2__378_3_CCSY Neurospora discreta fgenesh3_kg.24__2__378_3_CCSY I 0.424
NCU09995 Neurospora crassa NCU09995 I 0.424
fgenesh1_kg.C_scaffold_4000212 Cryphonectria parasitica fgenesh1_kg.C_scaffold_4000212 I 0.424
fgenesh1_pg.00866_#_414 Aspergillus carbonarius fgenesh1_pg.00866_#_414 I 0.424
GLOINDRAFT_339088 Rhizophagus irregularis GLOINDRAFT_339088 I 0.423
gw1.9.300.1 Sporobolomyces roseus gw1.9.300.1 I 0.423
NCAS_0I01260 Naumovozyma castellii NCAS_0I01260 I 0.422
Scas_Contig718.17 Saccharomyces castellii Scas_Contig718.17 I 0.422
CMQ_4428 Grosmannia clavigera CMQ_4428 I 0.421
PMAA_019170 Talaromyces marneffei PMAA_019170 I 0.421
TSTA_027170 Talaromyces stipitatus TSTA_027170 I 0.421
PMAA_019170 Penicillium marneffei PMAA_019170 I 0.421
GSTUM_00001197001 Tuber melanosporum GSTUM_00001197001 I 0.419
PVAR5_3907 Byssochlamys spectabilis PVAR5_3907 I 0.419
AB01906.1 Alternaria brassicicola AB01906.1 I 0.419
EFA82179.1 Polysphondylium pallidum EFA82179.1 I 0.418
EV44_g2085 Erysiphe necator EV44_g2085 I 0.417
Phatr3_J45968 Phaeodactylum tricornutum Phatr3_J45968 N 0.417
RHTO_03328 Rhodosporidium toruloides RHTO_03328 I 0.416
CPAG_02417 Candida parapsilosis CPAG_02417 I 0.415
AACERI_AaceriADL310W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL310W I 0.415
AGOS_ADL310W Ashbya gossypii AGOS_ADL310W I 0.415
Bcin11g05240 Botrytis cinerea Bcin11g05240 I 0.415
CD36_41610 Candida dubliniensis CD36_41610 I 0.415
CORT_0E02670 Candida orthopsilosis CORT_0E02670 I 0.415
DEHA2D17710g Debaryomyces hansenii DEHA2D17710g I 0.415
Ecym_7459 Eremothecium cymbalariae Ecym_7459 I 0.415
GNLVRS01_PISO0M04390g Millerozyma farinosa GNLVRS01_PISO0M04390g I 0.415
GNLVRS01_PISO0N04523g Millerozyma farinosa GNLVRS01_PISO0N04523g I 0.415
Kpol_1065p34 Vanderwaltozyma polyspora Kpol_1065p34 I 0.415
Kpol_376p1 Vanderwaltozyma polyspora Kpol_376p1 I 0.415
M437DRAFT_40541 Aureobasidium melanogenum M437DRAFT_40541 I 0.415
M7I_4892 Glarea lozoyensis M7I_4892 I 0.415
MYCFIDRAFT_57980 Pseudocercospora fijiensis MYCFIDRAFT_57980 I 0.415
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.415
SPAPADRAFT_62621 Spathaspora passalidarum SPAPADRAFT_62621 I 0.415
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.415
estExt_Genewise1Plus.C_80270 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80270 I 0.415
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.415