CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thaps8895
(
Thalassiosira pseudonana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Thaps8895
T332943_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thaps8895
Sox
9
31
INRPLNSYNLFFILERELLLQSK
Thaps8895
Sox
74
134
ADWYMHGKDKKTRKHIKTHGVISLKELSRSMAANWKMVDEDIKEYVTEVARMIKERRNQLD
Links
Other
Sox
family TFs
Other
Thalassiosira pseudonana
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thaps11719
Thalassiosira pseudonana
Thaps11719
N
0.707
Thaps8898
Thalassiosira pseudonana
Thaps8898
N
0.680
Phatr3_J39045
Phaeodactylum tricornutum
Phatr3_J39045
N
0.460
Phatr3_J48554
Phaeodactylum tricornutum
Phatr3_J48554
N
0.446
Thaps24755
Thalassiosira pseudonana
Thaps24755
N
0.416