CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thapsdraft1845
(
Thalassiosira pseudonana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Thapsdraft1845
T332946_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thapsdraft1845
Sox
70
136
LPKNWYVVGANRKKRQHHVNHGVISFVELTKTISQSWNTCDFATRMYCKGLADEEMDRYNAEIKAYE
Links
Other
Sox
family TFs
Other
Thalassiosira pseudonana
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thapsdraft1851
Thalassiosira pseudonana
Thapsdraft1851
N
0.731
Thapsdraft833
Thalassiosira pseudonana
Thapsdraft833
N
0.731
Thaps1869
Thalassiosira pseudonana
Thaps1869
N
0.550