CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_01986
(
Verticillium alfalfae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
VDBG_01986
T333209_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY15877
Sox
46
110
IPRPPNSWILYRQAHSRRIHEESPGLKAKAIAAMWRNESTDVKDHYKTLAATEAQKHKERYPDYK
Links
Other
Sox
family TFs
Other
Verticillium alfalfae
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_01986
Verticillium albo atrum
VDBG_01986
N
0.741
BN946_scf184994.g55
Trametes cinnabarina
BN946_scf184994.g55
I
0.450
OCS_06644
Ophiocordyceps sinensis
OCS_06644
N
0.445
MAJ_03732
Metarhizium majus
MAJ_03732
N
0.437
MGU_03716
Metarhizium guizhouense
MGU_03716
N
0.437
X797_003479
Metarhizium robertsii
X797_003479
N
0.437
GLOINDRAFT_12270
Rhizophagus irregularis
GLOINDRAFT_12270
I
0.436
FGRRES_08890
Fusarium graminearum
FGRRES_08890
N
0.430
FPSE_08224
Fusarium pseudograminearum
FPSE_08224
N
0.430