CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hsal_02240--XP_001122099.1_APIME
(
Harpegnathos saltator
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Hsal_02240--XP_001122099.1_APIME
T333753_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hsal_02240--XP_001122099.1_APIME
Sox
887
936
LKKEPSGFALYVKQNYNSVKKEKNNMRHADVMKILGQQFSALKIAKKNNQ
Links
Other
Sox
family TFs
Other
Harpegnathos saltator
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cflo_06149--XP_001122099.1_APIME
Camponotus floridanus
Cflo_06149--XP_001122099.1_APIME
N
0.645
NV14872
Nasonia vitripennis
NV14872
N
0.619
ACEP23223
Atta cephalotes
ACEP23223
N
0.598
TC012902
Tribolium castaneum
TC012902
N
0.526
LDEC009506
Leptinotarsa decemlineata
LDEC009506
N
0.522
L804_03818
Cryptococcus gattii
L804_03818
N
0.520
CNG00580
Cryptococcus neoformans
CNG00580
N
0.502
ACYPI006465
Acyrthosiphon pisum
ACYPI006465
N
0.477