CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_21000003
(
Phanerochaete chrysosporium
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
fgenesh1_pg.C_scaffold_21000003
T334106_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_21000003
Sox
31
97
STRAPSAYNLWMKDNLKKYKEEHPEVAQKDIMKAVGALWKDAPENPRRGQEPKARTKKAPQAKTKKP
Links
Other
Sox
family TFs
Other
Phanerochaete chrysosporium
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PHLGIDRAFT_36458
Phlebiopsis gigantea
PHLGIDRAFT_36458
N
0.643
EMIHUDRAFT_101489
Emiliania huxleyi
EMIHUDRAFT_101489
N
0.416