CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10013453.g
(
Linum usitatissimum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Lus10013453.g
T334563_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10013453
Sox
115
130
PKRPPTAFFIFMSVFV
Lus10013453
Sox
150
207
VLNRADFRKEYKEANPDCKEAKKVAKDAGEKWSSMTEDEKKPYIERAAQLKADFAKGS
Links
Other
Sox
family TFs
Other
Linum usitatissimum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.430
MAM_05902
Metarhizium album
MAM_05902
N
0.423
S40285_05706
Stachybotrys chlorohalonata
S40285_05706
N
0.421