orange1.1g021140m.g (Citrus sinensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 orange1.1g021140m.g T334635_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g021067m Sox 32 90
orange1.1g021075m Sox 32 90
orange1.1g021129m Sox 32 90
orange1.1g021137m Sox 32 90
orange1.1g021138m Sox 32 90
orange1.1g021140m Sox 32 90
orange1.1g023605m Sox 3 53

Links

Other Sox family TFs
Other Citrus sinensis TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10002333m.g Citrus clementina Ciclev10002333m.g N 0.741
Ciclev10021259m.g Citrus clementina Ciclev10021259m.g N 0.741
orange1.1g039610m.g Citrus sinensis orange1.1g039610m.g N 0.489
orange1.1g018613m.g Citrus sinensis orange1.1g018613m.g N 0.489