CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0707s0020
(
Salix purpurea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SapurV1A.0707s0020
T334714_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0707s0020.1.p
Sox
70
128
EQPRSPFRLFMEDFTKTGKIWNVIDIDRKGFETWRNMSKEERQPYITGADEINSAHVKC
Links
Other
Sox
family TFs
Other
Salix purpurea
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0019s07560
Populus trichocarpa
POPTR_0019s07560
N
0.638
cassava14219.m1
Manihot esculenta
cassava14219.m1
N
0.534
29729.m002338
Ricinus communis
29729.m002338
N
0.512
TCM_045441
Theobroma cacao
TCM_045441
N
0.441
evm.TU.supercontig_19.89
Carica papaya
evm.TU.supercontig_19.89
N
0.420
PK20108.1
Cannabis sativa
PK20108.1
N
0.415